LOCUS VTR99443.1 363 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana riboflavin biosynthesis protein : Riboflavin
biosynthesis protein RibD OS=Planctomyces maris DSM 8797
GN=PM8797T_10129 PE=3 SV=1: dCMP_cyt_deam_1: RibD_C protein.
ACCESSION LR593886-7076
PROTEIN_ID VTR99443.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_85160"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A6C361|A6C361_9PLAN ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Planctomyces maris DSM 8797
GN=PM8797T_10129 PE=3 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A3ZT34|A3ZT34_9PLAN ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Blastopirellula marina DSM
3645 GN=DSM3645_11472 PE=3 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2QZR9|D2QZR9_PIRSD ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1878 PE=3 SV=1
; EVALUE=1e-121 ; Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DGN1|L0DGN1_SINAD ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_3724 PE=3 SV=1 ; EVALUE=1e-120 ;
Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F0STF6|F0STF6_PLABD ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_2819 PE=3 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E8R1S3|E8R1S3_ISOPI ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Isosphaera pallida (strain
ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0754 PE=3 SV=1 ;
EVALUE=1e-113 ; Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5RPZ7|M5RPZ7_9PLAN ;
ALN/Q_length_ratio=0.937 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Rhodopirellula maiorica SM1
GN=RMSM_01698 PE=3 SV=1 ; EVALUE=1e-111 ;
Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|R5IDZ3|R5IDZ3_9BACT ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Alistipes sp. CAG:831
GN=BN796_01687 PE=3 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q3AC27|Q3AC27_CARHZ ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=ribD PE=3
SV=1 ; EVALUE=1e-106 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q2RK07|Q2RK07_MOOTA ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Moorella thermoacetica
(strain ATCC 39073) GN=Moth_0915 PE=3 SV=1 ; EVALUE=1e-105
; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|D9QR00|D9QR00_ACEAZ ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Acetohalobium arabaticum
(strain ATCC 49924 / DSM 5501 / Z-7288) GN=Acear_1431 PE=3
SV=1 ; EVALUE=1e-103 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K4LI24|K4LI24_THEPS ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Thermacetogenium phaeum
(strain ATCC BAA-254 / DSM 12270 / PB) GN=ribD PE=3 SV=1 ;
EVALUE=1e-103 ; Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D9SS95|D9SS95_CLOC7 ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Clostridium cellulovorans
(strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)
GN=Clocel_2846 PE=3 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D5SUY8|D5SUY8_PLAL2 ;
ALN/Q_length_ratio=1.041 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_3461 PE=3 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.905"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C9R9T2|C9R9T2_AMMDK ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Riboflavin
biosynthesis protein RibD OS=Ammonifex degensii (strain
DSM 10501 / KC4) GN=Adeg_1982 PE=3 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.981"
/note="Pfam_scan:hit_1 (1..102);
Pfam:PF00383.17:dCMP_cyt_deam_1;
Pfam_type:Family;HMM_aln_Length:97; HMM_Length:102;
EVALUE:1.6e-15; BITSCORE: 56.5"
/note="Pfam_scan:hit_2 (149..356); Pfam:PF01872.12:RibD_C;
Pfam_type:Family;HMM_aln_Length:197; HMM_Length:200;
EVALUE:9.3e-46; BITSCORE: 155.9"
/note="GO_domain:GO:0016810"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="Enzyme_Code:EC:3.5.4.26"
/note="Enzyme_Code:EC:1.1.1.193"
BEGIN
1 MNDLEPWMRH ALTLAARGRG LVEPNPMVGA VVLDASGQMV GEGWHQKFGG PHAEVFALAA
61 AGDRARGGTL VVTLEPCCHH GKTPPCTDAV LKAGVACVVV AMADPFPKVA GGGLSILRNS
121 GKEVRVGLLE SDALALNAPY LKLIRTGRPW VHAKWAMTLD GKIATRTGDS KWISGEESRR
181 RVHELRGRLD AIIVGRGTVV ADDPLLTVRP AGPRTPTRVV LSASGELPER CQLRSTAREV
241 PVIAYTTSAN ARKLDGWAAD GAEVVAFCEE TVTLDAVLAD LGRRRFTNVL IEGGAGILGS
301 AFDGRVVDEF HVFIAPKVIG GTEAAPPLGG TGVAKMAEAL TLQGVTFAQS GADVYVHGFA
361 RGV
//