LOCUS VTR98885.1 2394 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rhs repeat-associated core domain-containing
protein : YD repeat protein OS=Isosphaera pallida (strain
ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2419 PE=4 SV=1:
RHS_repeat: PT-HINT protein.
ACCESSION LR593886-6890
PROTEIN_ID VTR98885.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_01250"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DA66|L0DA66_SINAD ;
ALN/Q_length_ratio=0.279 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1341 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0D5P0|L0D5P0_SINAD ;
ALN/Q_length_ratio=0.449 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0291 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D7A8|L0D7A8_SINAD ;
ALN/Q_length_ratio=0.356 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0717 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.415"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8QWU3|E8QWU3_ISOPI ;
ALN/Q_length_ratio=0.454 ; DESCRIPTION=YD repeat protein
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_2419 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0D9R6|L0D9R6_SINAD ;
ALN/Q_length_ratio=0.429 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1226 PE=4 SV=1 ; EVALUE=1e-142 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5STB0|D5STB0_PLAL2 ;
ALN/Q_length_ratio=0.422 ; DESCRIPTION=AmoP
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_1036 PE=4 SV=1 ; EVALUE=1e-126
; Q/S_length_ratio=1.272"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SST5|D5SST5_PLAL2 ;
ALN/Q_length_ratio=0.454 ; DESCRIPTION=YD repeat protein
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_3067 PE=4 SV=1 ; EVALUE=1e-108
; Q/S_length_ratio=1.195"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2QZZ5|D2QZZ5_PIRSD ;
ALN/Q_length_ratio=0.465 ; DESCRIPTION=YD repeat protein
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_3703 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=1.172"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5SQM4|D5SQM4_PLAL2 ;
ALN/Q_length_ratio=0.212 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2663 PE=4 SV=1 ;
EVALUE=2e-72 ; Q/S_length_ratio=3.410"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D5SWT5|D5SWT5_PLAL2 ;
ALN/Q_length_ratio=0.206 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1602 PE=4 SV=1 ;
EVALUE=2e-67 ; Q/S_length_ratio=3.179"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D5SWT3|D5SWT3_PLAL2 ;
ALN/Q_length_ratio=0.149 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1600 PE=4 SV=1 ;
EVALUE=9e-39 ; Q/S_length_ratio=3.944"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q1Q7C5|Q1Q7C5_9BACT ;
ALN/Q_length_ratio=0.231 ; DESCRIPTION=Similar to
wall-associated protein OS=Candidatus Kuenenia
stuttgartiensis GN=WapA PE=4 SV=1 ; EVALUE=1e-38 ;
Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B8FIJ1|B8FIJ1_DESAA ;
ALN/Q_length_ratio=0.219 ; DESCRIPTION=YD repeat protein
OS=Desulfatibacillum alkenivorans (strain AK-01)
GN=Dalk_2288 PE=4 SV=1 ; EVALUE=9e-38 ;
Q/S_length_ratio=1.469"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D0THP1|D0THP1_9BACE ;
ALN/Q_length_ratio=0.226 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Bacteroides sp.
2_1_33B GN=HMPREF0103_2864 PE=4 SV=1 ; EVALUE=5e-37 ;
Q/S_length_ratio=1.711"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A3ZZ08|A3ZZ08_9PLAN ;
ALN/Q_length_ratio=0.226 ; DESCRIPTION=Uncharacterized
protein (Fragment) OS=Blastopirellula marina DSM 3645
GN=DSM3645_15255 PE=4 SV=1 ; EVALUE=3e-34 ;
Q/S_length_ratio=1.312"
/note="Pfam_scan:hit_1 (1812..1851);
Pfam:PF05593.9:RHS_repeat;
Pfam_type:Repeat;HMM_aln_Length:35; HMM_Length:38;
EVALUE:5.6e-05; BITSCORE: 23.1"
/note="Pfam_scan:hit_2 (2221..2289);
Pfam:PF07591.6:PT-HINT;
Pfam_type:Family;HMM_aln_Length:65; HMM_Length:130;
EVALUE:5.1e-09; BITSCORE: 36.0"
/note="GO_domain:GO:0051604"
BEGIN
1 MSHIDDAGGT RSLNLTQTVT YDAPGFEGLF LWKYVVENAS TTLHPSETIN GEGYVNVEYF
61 EDVELPVNFG TSTDWYKGYS DGIAYWTHDT HPFTKTYIAP GSTESFWFTT SPNWLADSSL
121 ELFQEDIKED ASYLYEANVK VPGGALPAFV PKSLATLGPL CVQSQVNPTA PPPLPNPQSS
181 TGNPIRYVDG VNLVVAPGLS STGFGGGWGT TQSWSNDPSY SAGTNAGNGW VAGDQPRLYR
241 TGSSLYLVTD AITAHFFDGQ GTPDGDGNYA TYAPRFFYNT TVTYDGANDQ FVITADDGTV
301 YRYLDFGSAR PVVSRGAFQS RTDPGGLITQ VTSRDTDGRP LEVQAAQTVG GVTTTESYLY
361 AYLGSGDTNA GKLASVTLRR KVGAGAWATV QQVAYAYYVS GDANGNWGDL KRLTVSDAAG
421 SVLDQRYYRY YTGDTFNGAT QIGYRGGLKY ELGPDAYARL KAAQGGTDAA VETTADATVA
481 TYADKYFEYD ALHRASKETV SGAGCTSCSA GQGAYTYSYT TSSNTIGHNS WATKTVETRP
541 DGSTNTVYTN AFGGVMLTAF ADVTTGLVSI TYYQYDSKGR VVLVANPSAV TGYSNAYPDL
601 VRFVSGNAQY LSDSSGLVTN YTYGASTTAT TLVPGDAVWY LKTIAIRQGE TSTAVPKESL
661 TYIMNTVGGL NFFHLASDTV YRNDNGTGGQ TTNYAYTFLA GTNQPATVTA TLPTVTTAQN
721 GSNSATAATV VSDAFGRPVW IRDEAGFITY TAYDTSSGAV VKIITDVDTA QTGTFTNLPS
781 GWVTPPGGGL HLVTSYEVDS LGRATKTTYP NGRIDYTVYN DTAHEVRYYA GWDATTNRPT
841 GPTAVVRVDR ANGYSETLTM SAPPTVSGGR PTGTESVSQV QSLSRSYTNE AGQLTHTDAY
901 FNPSGLAYST SSALGAEGVN FYRTRYEYDN TGQLKRVQTP QGTITRYVRN GFGEVVSEWV
961 GTDDTPTTGY WSPTNTTGTN LVKVREYQYD NGAVGDGNLT KVSEYPGGGA AARVTQTWYD
1021 WRNRAVAVKS GVETTESTSV NRQLVFYTYD NLDRVTMAQV YDADGVAPTV TGGVPQPLSA
1081 SLLRAQGATE FDELGRAFRT RVFSVNPATG AVSTNSLATD TWYDARGLTI KTSAPNGLVQ
1141 KWAYDGAGRV TTAYTGDWGG DAGYADADDV VGDTVLTQVE YVYDPSGNVR QVTTRDRFHD
1201 ASGTGALGTP TTGIAARVSY MGYYYDLADR TIAAVDVGTN GGSSWSRPGA VPSRSATVLV
1261 TSTKYATDAV QVIKLTGSPT GGTFTLTFGV NTTGAIAYNA SAATVQTALA GLASIGAGNV
1321 QVSAAAGGGW EIRFIGTKAG AYQSAIAANG AGLTGGTAPA ASVSTINAGG DVGLAAEVTD
1381 AAGRVTRTYA DALGRTTRTV ANFVDGVVSD VDDKATGYMY NGAGITSVIA YLSGGGVQTT
1441 GYVYGVSSAT GSAVESNEIV RLTQWADPTS GAASATEQES VTVNALGQTV TTTDRNGNVH
1501 VLTYDVLGRV VSDSVTASGT NVGMIETGYD TLGNASLVTS RDATNAIVNQ VAREYNGLGQ
1561 LTAEWQSHSG AVTGSTPKVQ YAYNFNGGGT TNQSRLTSIT YPSGYVLTFN YSSGINSAVS
1621 RVSSLSDPNG AVESYDYLGL DTVVRRAHSG PSLDLSYIKR AGESNGDAGD QYTGLDRFGR
1681 IVDQRWLNPT TGTATDRFQY GYDQAGNRTY RDNLVSATLG EVYTYDALDQ LTAYSRGTLN
1741 GTKTGVTGTA SRTQNWDYDA LGNFDSVTTN GTAQARTANK QNEITSISGV TTPTYDANGN
1801 MTKDETGKLY VYDAWNRLVT VKNSGGTVLK TYTYDGLNRR ITETASGTTT DLFYSRDWQV
1861 LEEKVGSTTK TRYVWSPVYV NAMVLRDRDA DGSTGNGLEE RLWVQQDANF NVTALANSSG
1921 AVVERYLYDP YGNVTVTNAS GTTLGSSAYA WAHTFQGMRL DTTSGFLEAN QRWYSPILGR
1981 WVTLDPIRYA AGDMNLYRFV GNNSTNVTDP SGLDPLISVA PTGPDSPGGK FAHGVIDTIA
2041 EPFRIGGDLI RVGQWTVNTQ LLGREMYEPD WHSNLAKKAP QANASPEEWD EYAKKSFKKH
2101 AKNSAIAVIT FGAGKAAGPI IRKLRKPACV NCFPADTVVG TEHGLKPIQD VRAADRVWAF
2161 DLVVGEWKLR QVIETYRHEH DGDMVTATVA GEMIESTGHH PWWVARGEGL RGRPQPEHVP
2221 DNPDGYDRGG RWVDAIDLRV GDVLLLRSGE EAAITELVAR HAKLPVYNFH VEELHCYAVG
2281 RAQILVHNNS VDVKSLNIAG STDAVFHPEI VQGMRLQIRA NSKKFWADAL AKDGPIEIWE
2341 IGGKRYLFNG NHRYRAALAE DVAIPEANLK IIDKTGSKIP TFGLNEMVPA PGLK
//