LOCUS VTR98832.1 412 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana tyrosine recombinase : Uncharacterized
protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_10342
PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-6872
PROTEIN_ID VTR98832.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_01430"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZM09|A3ZM09_9PLAN ;
ALN/Q_length_ratio=0.757 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_10342 PE=4 SV=1 ; EVALUE=6e-77 ;
Q/S_length_ratio=1.237"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5T5X3|M5T5X3_9PLAN ;
ALN/Q_length_ratio=0.791 ; DESCRIPTION=Integrase family
protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_03018 PE=4
SV=1 ; EVALUE=2e-67 ; Q/S_length_ratio=1.212"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K5D6I0|K5D6I0_RHOBT ;
ALN/Q_length_ratio=0.852 ; DESCRIPTION=Tyrosine
recombinase XerC OS=Rhodopirellula baltica SH28
GN=RBSH_02353 PE=4 SV=1 ; EVALUE=3e-63 ;
Q/S_length_ratio=1.138"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5UBZ8|M5UBZ8_9PLAN ;
ALN/Q_length_ratio=0.915 ;
DESCRIPTION=Integrase/recombinase OS=Rhodopirellula
sallentina SM41 GN=RSSM_05035 PE=4 SV=1 ; EVALUE=1e-58 ;
Q/S_length_ratio=1.067"
/note="Pfam_scan:hit_1 (223..390);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:143; HMM_Length:173;
EVALUE:1.3e-07; BITSCORE: 31.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MSGGSLKKPK KPYAEFPLTP HASGKWMKKI RGTIHYFGAW ARRVNGKLVR AERDGWKEAL
61 EAYKAVADDL HAGRTPRVKK DGLTVADLAN QFLTSKLRKV ESGELSPNLF YDYRLITDLL
121 VASFGSTRLV NDLAADDFSQ LRATMAKRWG PVRLGNSVTR AKSVFKFGYE SGLLERPVRF
181 GPDFVKPDKA VLRRHRAARP AKLFERKDLL AMIEGKGATD DGGEKMVRAD HTLCAMILLG
241 VNCGFGNTDC SELTFTALDL KKGWIDFPRP KTGIARRCPL WSETVAAIRG SIAVRREPAS
301 PKDVNRVFLT ARGTPLIVQK RPGYRNDLIK SRLHHLLKVL GILRAGMSFY AFRHTFETIA
361 GDSKDQVAVN LIMGHTDPSM AAVYRERIDD ARLRAVADHV RNWLWPDRAT AE
//