LOCUS VTR98461.1 455 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis protein : Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4685 PE=
4 SV=1: Response_reg: Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-6748
PROTEIN_ID VTR98461.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_02670"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DHZ7|L0DHZ7_SINAD ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4685 PE=4 SV=1
; EVALUE=1e-176 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A090KM98|A0A090KM98_9BACT ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-175 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B4CY78|B4CY78_9BACT ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1519 PE=4
SV=1 ; EVALUE=1e-172 ; Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B1ZUP3|B1ZUP3_OPITP ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Opitutus terrae (strain DSM 11246 / PB90-1)
GN=Oter_1643 PE=4 SV=1 ; EVALUE=1e-165 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B9XIV9|B9XIV9_PEDPL ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3245
PE=4 SV=1 ; EVALUE=1e-165 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|I4C4T2|I4C4T2_DESTA ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM
6799 / DCB-1) GN=Desti_1865 PE=4 SV=1 ; EVALUE=1e-161 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E1YG22|E1YG22_9DELT ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Alginate
biosynthesis transcriptional regulatory protein algB
OS=uncultured Desulfobacterium sp. GN=N47_J04970 PE=4 SV=1
; EVALUE=1e-161 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q0YPF0|Q0YPF0_9CHLB ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Response regulator
receiver:Sigma-54 factor, interaction
region:Helix-turn-helix, Fis-type:ATPase associated with
various cellular activities, AAA_5 OS=Chlorobium
ferrooxidans DSM 13031 GN=CferDRAFT_0298 PE=4 SV=1 ;
EVALUE=1e-159 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B3EEH2|B3EEH2_CHLL2 ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Chlorobium limicola (strain DSM 245 / NBRC 103803)
GN=Clim_1741 PE=4 SV=1 ; EVALUE=1e-157 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E3FM27|E3FM27_STIAD ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Stigmatella aurantiaca
(strain DW4/3-1) GN=STAUR_0222 PE=4 SV=1 ; EVALUE=1e-157 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0LLJ8|A0LLJ8_SYNFM ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Two-component
response regulator AlgB OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=Sfum_2622 PE=4 SV=1 ;
EVALUE=1e-157 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|U2SJ64|U2SJ64_9DELT ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=Response regulator
of zinc sigma-54-dependent two-component system
OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_07338
PE=4 SV=1 ; EVALUE=1e-156 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A084ST79|A0A084ST79_9DELT ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Chemotaxis protein
CheY OS=Cystobacter violaceus Cb vi76 GN=Q664_20595 PE=4
SV=1 ; EVALUE=1e-156 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q1DFW8|Q1DFW8_MYXXD ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Myxococcus xanthus
(strain DK 1622) GN=MXAN_0172 PE=4 SV=1 ; EVALUE=1e-156 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C7LVC0|C7LVC0_DESBD ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfomicrobium baculatum (strain DSM 4028 / VKM
B-1378) GN=Dbac_0335 PE=4 SV=1 ; EVALUE=1e-156 ;
Q/S_length_ratio=1.022"
/note="Pfam_scan:hit_1 (10..120);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:112;
EVALUE:4e-23; BITSCORE: 81.5"
/note="Pfam_scan:hit_2 (148..315);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:164; HMM_Length:168;
EVALUE:3.7e-64; BITSCORE: 215.2"
/note="Pfam_scan:hit_3 (408..447); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42;
EVALUE:8.3e-07; BITSCORE: 28.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MKHTTEPFNL LVIDDETALR RTLRTALESM DHKVTEAANS AQALEAVRRQ RFDLAFLDLK
61 LGTEKGLDLL PELLRSAGDL HVVIVTAFAG FDSAVEAMRK GAFDYLPKPF TPNQIRMVLD
121 RSALVRGLRN RVAALEERVG GPDPATELET QEPAMQRVLD AAFQVAPTDA TVLLRGESGT
181 GKNVLARALH ARSKRSKRPF VTVHCPSLSA ELLESDLFGH TRGAFTGAVQ DKTGKVDAAD
241 GGTLFLDEVG DLPPVLQPKL LRLVQDREYE RVGEPIVRRA DVRIVAATNR PLEAEVAAGR
301 FREDLFYRLN VIDLTVPSLR SRRKDLLSIA RGLLAFFNRQ SGKSVTGFTA EAEAVMNAYS
361 WPGNVRELRN AVERGVIMTA GPEIGVEHLP GQLTTAPAPR MEIGGHVTLE DLEAEHIRRV
421 IASAPSLDEA AQVLGIDPST LWRKRKRSNP PKGNP
//