LOCUS VTR98368.1 607 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana gtp-binding protein : GTP-binding protein
TypA OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1239 PE=4 SV=1: GTP_EFTU:
GTP_EFTU_D2: EFG_C protein.
ACCESSION LR593886-6717
PROTEIN_ID VTR98368.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_02980"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I3IM92|I3IM92_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=GTP-binding protein
OS=planctomycete KSU-1 GN=KSU1_C1241 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DLY3|L0DLY3_SINAD ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=GTP-binding protein
TypA/BipA OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5699
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B0NRX7|B0NRX7_BACSE ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=GTP-binding protein
TypA OS=Bacteroides stercoris ATCC 43183 GN=typA PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I6YY20|I6YY20_MELRP ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=GTP-binding protein
TypA/BipA OS=Melioribacter roseus (strain JCM 17771 /
P3M-2) GN=MROS_2197 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6C4I2|A6C4I2_9PLAN ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_25496
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|R6LEB9|R6LEB9_9BACE ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=GTP-binding protein
TypA OS=Bacteroides clarus CAG:160 GN=BN507_01257 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F0SRJ4|F0SRJ4_PLABD ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=GTP-binding protein
TypA OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM
5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0428
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|G8TGC3|G8TGC3_NIAKG ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=GTP-binding protein
TypA OS=Niastella koreensis (strain DSM 17620 / KACC 11465
/ GR20-10) GN=Niako_6538 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|I0IIS6|I0IIS6_PHYMF ;
ALN/Q_length_ratio=1.023 ; DESCRIPTION=GTP-binding protein
TypA OS=Phycisphaera mikurensis (strain NBRC 102666 / KCTC
22515 / FYK2301M01) GN=typA PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|J9GAY5|J9GAY5_9ZZZZ ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=GTP-binding
elongation factor family protein TypA/BipA OS=gut
metagenome GN=EVA_15341 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2QXV8|D2QXV8_PIRSD ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=GTP-binding protein
TypA OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 /
ICPB 4128) GN=Psta_3371 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|S3YHE1|S3YHE1_BACSE ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=GTP-binding protein
TypA/BipA OS=Bacteroides stercoris CC31F
GN=HMPREF1181_00245 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|R6AD88|R6AD88_9BACE ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=GTP-binding protein
TypA OS=Bacteroides stercoris CAG:120 GN=BN477_01319 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|I0AID9|I0AID9_IGNAJ ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Putative membrane
GTPase OS=Ignavibacterium album (strain DSM 19864 / JCM
16511 / NBRC 101810 / Mat9-16) GN=IALB_1035 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SUM1|D5SUM1_PLAL2 ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=GTP-binding protein
TypA OS=Planctomyces limnophilus (strain ATCC 43296 / DSM
3776 / IFAM 1008 / 290) GN=Plim_1239 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.993"
/note="Pfam_scan:hit_1 (4..203); Pfam:PF00009.22:GTP_EFTU;
Pfam_type:Domain;HMM_aln_Length:186; HMM_Length:188;
EVALUE:2e-48; BITSCORE: 164.3"
/note="Pfam_scan:hit_2 (226..297);
Pfam:PF03144.20:GTP_EFTU_D2;
Pfam_type:Domain;HMM_aln_Length:73; HMM_Length:74;
EVALUE:3.6e-08; BITSCORE: 33.4"
/note="Pfam_scan:hit_3 (403..490); Pfam:PF00679.19:EFG_C;
Pfam_type:Domain;HMM_aln_Length:82; HMM_Length:89;
EVALUE:4.2e-18; BITSCORE: 64.9"
/note="GO_domain:GO:0003924"
/note="GO_domain:GO:0043167"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MKRNDIRNVA VIAHVDHGKT TLVDQMLRQS GQFRSEELDK LVGGQHGLIM DSNDQERERG
61 ITILAKNCGI RIGDVKVNLI DTPGHADFGG EVERILKMAD GAFVLVDAAE GPLPQTRFVL
121 KKAFAAGLRP IVIINKIDRP DARIADVHAL MFDLFIELGA DDETAVFPII YASGRAGIAT
181 TDLEVEPKDL SPLFDAILEK VPSPDVDESA PLQMQVMALQ YSEFVGKIAI GKIFAGKIRK
241 NQKVSVVKQK DGTVFPDTVV QVLEFDRLAK REVEELKAGD VCAIVGIDDA DIGDTICEFD
301 KPHALPPLTI DEPTLDMVFR VNDSPFAGQD GKPLTSRELR DRLQKELQHN VALRVKPGAR
361 ESEFIVSGRG LLHLGVLLET IRREGGEVAV GKPQVIVKEI DGQKQEPYEH LVVEVPAEHQ
421 NTVMRLVLER QGEFQRMESH RGSTQVEFHI PARSLIGLRT RMLTGTQGTA IMHHNFLDYR
481 PVRGAQAGRP TGVFISKDTG KVTAYSAEDL SGNLFVAPQD AVYEGQIVGE HGRDNDMVVN
541 VTRPKPLTNM RASGSDKAAV LKPPTVFSME MALEFIEDDE LVEITPAAVR MRKLYLKEGD
601 RKRQSRG
//