LOCUS VTR98178.1 769 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana glycogen debranching enzyme : Isoamylase
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_0445 PE=4 SV=1: CBM_48: Alpha-amylase protein.
ACCESSION LR593886-6654
PROTEIN_ID VTR98178.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_03610"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q1NJ08|Q1NJ08_9DELT ;
ALN/Q_length_ratio=0.757 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=delta proteobacterium MLMS-1
GN=MldDRAFT_1821 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D6Z462|D6Z462_DESAT ;
ALN/Q_length_ratio=0.758 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Desulfurivibrio alkaliphilus
(strain DSM 19089 / UNIQEM U267 / AHT2) GN=DaAHT2_1644
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.091"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F4LL38|F4LL38_TREBD ;
ALN/Q_length_ratio=0.769 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Treponema brennaborense (strain
DSM 12168 / CIP 105900 / DD5/3) GN=Trebr_2200 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.077"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H1XPK1|H1XPK1_9BACT ;
ALN/Q_length_ratio=0.776 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Caldithrix abyssi DSM 13497
GN=Calab_0276 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.089"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5BZD3|D5BZD3_NITHN ;
ALN/Q_length_ratio=0.765 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Nitrosococcus halophilus (strain
Nc4) GN=Nhal_3095 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.082"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E1R2J3|E1R2J3_SPISS ;
ALN/Q_length_ratio=0.741 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Spirochaeta smaragdinae (strain
DSM 11293 / JCM 15392 / SEBR 4228) GN=Spirs_3465 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.099"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M1PFD3|M1PFD3_DESSD ;
ALN/Q_length_ratio=0.740 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Desulfocapsa sulfexigens (strain
DSM 10523 / SB164P1) GN=UWK_01833 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.119"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A098R400|A0A098R400_9SPIO ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=Glycogen
debranching protein OS=Spirochaeta sp. JC230 GN=DC28_03555
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.079"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q60C15|Q60C15_METCA ;
ALN/Q_length_ratio=0.759 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=glgX PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F8F2F1|F8F2F1_TRECH ;
ALN/Q_length_ratio=0.774 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Treponema caldaria (strain ATCC
51460 / DSM 7334 / H1) GN=Spica_2840 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q1NLM1|Q1NLM1_9DELT ;
ALN/Q_length_ratio=0.757 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=delta proteobacterium MLMS-1
GN=MldDRAFT_2600 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F5Y9B3|F5Y9B3_TREAZ ;
ALN/Q_length_ratio=0.772 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Treponema azotonutricium (strain
ATCC BAA-888 / DSM 13862 / ZAS-9) GN=glgX PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.071"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E8RDL7|E8RDL7_DESPD ;
ALN/Q_length_ratio=0.744 ; DESCRIPTION=Glycogen operon
protein GlgX homolog OS=Desulfobulbus propionicus (strain
ATCC 33891 / DSM 2032 / 1pr3) GN=Despr_2904 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.106"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A0A2HYR3|A0A0A2HYR3_9DELT ;
ALN/Q_length_ratio=0.752 ; DESCRIPTION=Glycogen
debranching protein OS=Desulfobulbus sp. Tol-SR
GN=JT06_03380 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.091"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8QYR4|E8QYR4_ISOPI ;
ALN/Q_length_ratio=0.743 ; DESCRIPTION=Isoamylase
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_0445 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.089"
/note="Pfam_scan:hit_1 (14..104); Pfam:PF02922.13:CBM_48;
Pfam_type:Domain;HMM_aln_Length:84; HMM_Length:85;
EVALUE:4.6e-08; BITSCORE: 32.9"
/note="Pfam_scan:hit_2 (173..536);
Pfam:PF00128.19:Alpha-amylase;
Pfam_type:Domain;HMM_aln_Length:308; HMM_Length:316;
EVALUE:1.4e-20; BITSCORE: 73.9"
/note="GO_domain:GO:0005975"
/note="GO_domain:GO:0006091"
/note="GO_domain:GO:0009056"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0016798"
BEGIN
1 MTPPFRTSRG RPLPLGPSLT PDGANFALLC RHGQRVTLVI LPVGGGNTPL AEFPLEARKN
61 RTGDHWHIRV HDLPEAFCYG WRVDGPHGPR TRFDPSRLLL DPSAVMLSDN AEWAGTCETD
121 PQRTSRRSLY RRGTRYNWED DTPPLTEYED SLIYEVHVRG FTCDPSSGVA DRGTFRGLVE
181 KIPYLKWLGV TAVELMPVFE WDECDCPFVN PETGEKLTNF WGYNPVAFAA PKAGFAASAR
241 QFGQTHEFRD MVKAMHAAGI EVILDVVFNH TGEGNDAGRT YSFRGLDNEL YYLMDDQGKY
301 LNYSGCGNTV NCNHPIVRDL IMTCLRYWVG DMHVDGFRFD LASILGRDRR GNVMVEPPVI
361 ESITEDGVLA DTKLIAEPWD AGGLYQVGRF PFGRRWSEWN GKYRDDVRQF WKGDYGMTAA
421 LADRICGSAD LYQWSGRLPR HSVNFVTAHD GFTLNDLVSY NEKHNEANGE QGRDGENHNN
481 SWNCGTEGET TDPSVLALRE RQAKNMMTTL MISQGVPMLL AGDEFLRTQK GNNNAWCQDN
541 EISWVNWALA EKNKDFLRFV RELIHLRKRH PALRRRRFFV GEFMRGEPAR EVRGFPATTP
601 PPVAGEPGKA VHGGDVFPSA GPVRPGDSGL PPGADTSAVA EFARAGRELG AAVLPALADI
661 HWHGTEPYQP DWGHSSRTLV FALDGRFTGR EHDPDYHIDN DFYVAMNAWS EPLKFRIPPA
721 PTRRRWRRMI DTALPSPDDI IPTENGPVVP EGSVYTVAAF TTLVLISEA
//