LOCUS VTR97915.1 1144 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana diguanylate cyclase : Sensory box protein
OS=Janthinobacterium agaricidamnosum NBRC 102515 = DSM
9628 GN=GJA_4246 PE=4 SV=1: PAS_3: PAS_3: PAS_3: PAS_3:
PAS_8: HisKA: HATPase_c: Response_reg protein.
ACCESSION LR593886-6537
PROTEIN_ID VTR97915.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_04780"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|W0VAE6|W0VAE6_9BURK ;
ALN/Q_length_ratio=0.774 ; DESCRIPTION=Sensory box protein
OS=Janthinobacterium agaricidamnosum NBRC 102515 = DSM
9628 GN=GJA_4246 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.275"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A031GG52|A0A031GG52_9BURK ;
ALN/Q_length_ratio=0.672 ; DESCRIPTION=PAS domain S-box
protein OS=Janthinobacterium lividum GN=BW37_05436 PE=4
SV=1 ; EVALUE=1e-172 ; Q/S_length_ratio=1.284"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A085FA04|A0A085FA04_9BURK ;
ALN/Q_length_ratio=0.559 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia sp. LC238 GN=FG94_02777 PE=4 SV=1 ;
EVALUE=1e-170 ; Q/S_length_ratio=1.490"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A086W666|A0A086W666_9BURK ;
ALN/Q_length_ratio=0.565 ; DESCRIPTION=Diguanylate cyclase
OS=Massilia consociata GN=JN27_22675 PE=4 SV=1 ;
EVALUE=1e-167 ; Q/S_length_ratio=1.476"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A085ESU1|A0A085ESU1_9BURK ;
ALN/Q_length_ratio=0.588 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia sp. LC238 GN=FG94_04812 PE=4 SV=1 ;
EVALUE=1e-165 ; Q/S_length_ratio=1.273"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K9DK79|K9DK79_9BURK ;
ALN/Q_length_ratio=0.585 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia timonae CCUG 45783 GN=HMPREF9710_00850
PE=4 SV=1 ; EVALUE=1e-163 ; Q/S_length_ratio=1.469"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9D6S4|K9D6S4_9BURK ;
ALN/Q_length_ratio=0.559 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia timonae CCUG 45783 GN=HMPREF9710_04781
PE=4 SV=1 ; EVALUE=1e-161 ; Q/S_length_ratio=1.465"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K9TRG6|K9TRG6_9CYAN ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=PAS domain S-box
OS=Oscillatoria acuminata PCC 6304 GN=Oscil6304_5261 PE=4
SV=1 ; EVALUE=1e-149 ; Q/S_length_ratio=0.824"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085F305|A0A085F305_9BURK ;
ALN/Q_length_ratio=0.473 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia sp. LC238 GN=FG94_03408 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=1.752"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G7UT55|G7UT55_PSEUP ;
ALN/Q_length_ratio=0.475 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Pseudoxanthomonas spadix
(strain BD-a59) GN=DSC_07345 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=1.796"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A068YNV1|A0A068YNV1_9BURK ;
ALN/Q_length_ratio=0.437 ; DESCRIPTION=Chemotaxis protein
methyltransferase CheR OS=Polaromonas sp. CG9_12 PE=4 SV=1
; EVALUE=1e-133 ; Q/S_length_ratio=1.739"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|T1W671|T1W671_9ZZZZ ;
ALN/Q_length_ratio=0.543 ; DESCRIPTION=PAS fold (Fragment)
OS=uncultured organism PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=1.270"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A068Z2Z8|A0A068Z2Z8_9BURK ;
ALN/Q_length_ratio=0.354 ; DESCRIPTION=Signal transduction
histidine kinase OS=Polaromonas sp. CG9_12 PE=4 SV=1 ;
EVALUE=1e-125 ; Q/S_length_ratio=1.414"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A089C3P1|A0A089C3P1_9BURK ;
ALN/Q_length_ratio=0.552 ; DESCRIPTION=Sensory box protein
OS=Burkholderia xenovorans GN=DR64_6618 PE=4 SV=1 ;
EVALUE=1e-122 ; Q/S_length_ratio=1.474"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S4Y970|S4Y970_SORCE ;
ALN/Q_length_ratio=0.531 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_50590
PE=4 SV=1 ; EVALUE=1e-122 ; Q/S_length_ratio=1.842"
/note="Pfam_scan:hit_1 (170..251); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:74; HMM_Length:91;
EVALUE:2.3e-07; BITSCORE: 30.8"
/note="Pfam_scan:hit_2 (295..384); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:86; HMM_Length:91;
EVALUE:1.3e-11; BITSCORE: 44.4"
/note="Pfam_scan:hit_3 (424..508); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:88; HMM_Length:91;
EVALUE:2.2e-09; BITSCORE: 37.3"
/note="Pfam_scan:hit_4 (548..636); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:88; HMM_Length:91;
EVALUE:1.8e-20; BITSCORE: 72.7"
/note="Pfam_scan:hit_5 (654..730); Pfam:PF13188.1:PAS_8;
Pfam_type:Domain;HMM_aln_Length:56; HMM_Length:64;
EVALUE:7.6e-08; BITSCORE: 31.9"
/note="Pfam_scan:hit_6 (782..847); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:68;
EVALUE:3.2e-12; BITSCORE: 46.2"
/note="Pfam_scan:hit_7 (893..1003);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:111;
EVALUE:7.2e-28; BITSCORE: 96.5"
/note="Pfam_scan:hit_8 (1025..1136);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:112;
EVALUE:5.5e-22; BITSCORE: 77.8"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MGDERVLVLM PTGRDGERTR AALEGGGLTA VVCADTGSLC REIAAGAGTA LLTEEALVGS
61 GNTLQEALRS QPPWSDFPLV VLAREGAADR GLEIREAMNA TLVERPVKIR SLLSVVRAAL
121 RDRRHQYAVR DHLAERERQA EALRESEDRL HVALRAGRMG TWDIDLATMR MTCSDSCKAN
181 YGRGPGEPFT YEELTAGVHE DDQELWRGVV EDAVARSGEF EIEYRTLWPD STMHWVHVRG
241 NCTTVAGRRL LSGVSLDITG RVLAERTARS GQERLRAALV AARMVAWEWT PADRKLHVSE
301 TAADVFGLPA GVGLTGIDQG LALVHPEDVA AYEATYRDAI ERRGSYHIHY RLVRPSDGRV
361 IWIEERGTAV FDQPDGGVRL FGVAADVTER KRSEAEAIQL GERLRMALDA GGLGTWEWNP
421 ATDEMTVSAR ASEMCGTPVG GPHGREQGRR MIHPDDRERA RRAAEQAVAE KADYDIEYRL
481 ADRPVWVAAH GRGLYDATGN LVRVHGVVQD ITERKRAEEE AVRMAERLRL ALEAGGTGVW
541 EWDIVTGRII WSDQVHAFYG MAPGEFDGTL ETFTRHLHPD DADRAREAIR ASVEDDIPYR
601 IEYRIVPKGG GLRWISTAGR VIRDAGGRPL RMIGATSDVT DRRLTEDAIR VSERRFRTLF
661 DSMDQGFCVI EVTFEDGRAA DYRFVELNPA FERHSGLSPD LLGKSIREAV PGLEEFWFDT
721 YGRVAATGEP TRFVHHAAPL ARWFEVYAFR LENPDRHRVA ILFADVTDRM RAEQELRDQD
781 RKKDDFIALL AHELRNPLAP IRNGLQVIRR SDERAARERS QEMMDRQLTH MVRLIDDLLD
841 VSRIGRNKME LRRERVALTD VIASAVETAQ PAIEAAGHEL SVTLPGRPVD LDADLTRLAQ
901 VFSNLLTNSA KYTHRGGKVW ITAELHGSVV SVSVRDNGIG IPAAALPTIF DMFSQVDRSI
961 ERSTGGLGIG LALVKGLTEM HGGTVTAASE GAGSTFTVTL PVLASKPDAR TEAPPAIMNG
1021 ESHKILVVDD NRDGAESLSQ LLEVLGHEVR TAYDGIEAVT AAQEYRPDVI LMDVGMPRLN
1081 GYDATRQIRA QDWSAGVTII ALTGWGQEGD RKLSKEAGCD GHLVKPVSLP DLERMLGELH
1141 RAAD
//