LOCUS VTR97889.1 250 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna sigma-24 ecf subfamily : RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_4864 PE=4 SV=1 protein.
ACCESSION LR593886-6524
PROTEIN_ID VTR97889.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_04910"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B4D7E9|B4D7E9_9BACT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_4864 PE=4 SV=1 ; EVALUE=2e-63 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B9XQ22|B9XQ22_PEDPL ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Pedosphaera parvula
(strain Ellin514) GN=Cflav_PD1163 PE=4 SV=1 ; EVALUE=3e-63
; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B9XMJ1|B9XMJ1_PEDPL ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Pedosphaera parvula
(strain Ellin514) GN=Cflav_PD2892 PE=4 SV=1 ; EVALUE=2e-59
; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B9XIS9|B9XIS9_PEDPL ;
ALN/Q_length_ratio=0.848 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily (Fragment) OS=Pedosphaera
parvula (strain Ellin514) GN=Cflav_PD3038 PE=4 SV=1 ;
EVALUE=1e-58 ; Q/S_length_ratio=1.163"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B4D527|B4D527_9BACT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_4016 PE=4 SV=1 ; EVALUE=8e-58 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B9XPT4|B9XPT4_PEDPL ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Pedosphaera parvula
(strain Ellin514) GN=Cflav_PD1459 PE=4 SV=1 ; EVALUE=1e-54
; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B4D257|B4D257_9BACT ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_2982 PE=4 SV=1 ; EVALUE=1e-54 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B4CV32|B4CV32_9BACT ;
ALN/Q_length_ratio=0.852 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_0545 PE=4 SV=1 ; EVALUE=2e-54 ;
Q/S_length_ratio=1.106"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B4D8G2|B4D8G2_9BACT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_5202 PE=4 SV=1 ; EVALUE=2e-52 ;
Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L0DDW3|L0DDW3_SINAD ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=DNA-directed RNA
polymerase specialized sigma subunit, sigma24
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_2760 PE=4 SV=1 ;
EVALUE=2e-50 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|X0UZF5|X0UZF5_9ZZZZ ;
ALN/Q_length_ratio=0.812 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S08636 (Fragment) OS=marine
sediment metagenome GN=S01H1_37276 PE=4 SV=1 ;
EVALUE=2e-48 ; Q/S_length_ratio=1.185"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B4DBF5|B4DBF5_9BACT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=RNA polymerase,
sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_6246 PE=4 SV=1 ; EVALUE=3e-47 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|W0J9K5|W0J9K5_9BACT ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=RNA polymerase
sigma-70 factor OS=Opitutaceae bacterium TAV5
GN=OPIT5_27940 PE=4 SV=1 ; EVALUE=3e-47 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I6AN26|I6AN26_9BACT ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Opitutaceae bacterium
TAV1 GN=OpiT1DRAFT_00832 PE=4 SV=1 ; EVALUE=2e-45 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A6DQ31|A6DQ31_9BACT ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Uncharacterized
protein OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_24214
PE=4 SV=1 ; EVALUE=2e-45 ; Q/S_length_ratio=1.042"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSRALGNRPE TADGPGLFLT TQWTLVLRGR DAQSPDGRAA LAALCECYWY PLYVHIRRRV
61 RSAEDAADLT QGFFAHLLES NLFASVAPCS GKLRAYLLAC CNHFLANEWD RAAAQKRGGG
121 RTPLSIDFAA AESRYTTEPV DRLGPDRLYE RRWALTLLDE ALTALERDYD SAGRGELFRL
181 LKPALVAADE VQQHATIAAT LGTSVPAVKK AAQRLRTRYG QRLRELVAAT VGGPGDVDEE
241 LRDLFAAVAR
//