LOCUS VTR97696.1 252 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcriptional family : Transcriptional
regulator, AraC family OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_1261 PE=4 SV=1:
PAS_4: HTH_18 protein.
ACCESSION LR593886-6427
PROTEIN_ID VTR97696.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_05880"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2QW64|D2QW64_PIRSD ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_1261 PE=4 SV=1 ;
EVALUE=1e-90 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5S4Z7|M5S4Z7_9PLAN ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula maiorica SM1
GN=RMSM_01806 PE=4 SV=1 ; EVALUE=1e-82 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K5DDE9|K5DDE9_RHOBT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula baltica SH28
GN=RBSH_04210 PE=4 SV=1 ; EVALUE=2e-82 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L7CFC4|L7CFC4_RHOBT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula baltica SWK14
GN=RBSWK_03358 PE=4 SV=1 ; EVALUE=2e-82 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F2AUI9|F2AUI9_RHOBT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula baltica WH47
GN=RBWH47_02722 PE=4 SV=1 ; EVALUE=2e-82 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q7UGE2|Q7UGE2_RHOBA ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Probable
transcription regulator OS=Rhodopirellula baltica (strain
SH1) GN=RB5275 PE=4 SV=1 ; EVALUE=4e-82 ;
Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M2ABS6|M2ABS6_9PLAN ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula europaea 6C
GN=RE6C_05029 PE=4 SV=1 ; EVALUE=9e-82 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5SA11|M5SA11_9PLAN ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula europaea SH398
GN=RESH_04878 PE=4 SV=1 ; EVALUE=4e-81 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5U5W4|M5U5W4_9PLAN ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=AraC family
transcriptional regulator OS=Rhodopirellula sallentina
SM41 GN=RSSM_01686 PE=4 SV=1 ; EVALUE=7e-81 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5TC15|M5TC15_9PLAN ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula sp. SWK7
GN=RRSWK_00418 PE=4 SV=1 ; EVALUE=3e-79 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5T9L1|M5T9L1_9PLAN ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhodopirellula sp. SWK7
GN=RRSWK_01671 PE=4 SV=1 ; EVALUE=1e-77 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W5V6C5|W5V6C5_PSEAI ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas aeruginosa YL84
GN=AI22_14355 PE=4 SV=1 ; EVALUE=9e-69 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U8H580|U8H580_PSEAI ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=Transcriptional
regulator OS=Pseudomonas aeruginosa BL18 GN=Q072_03210
PE=4 SV=1 ; EVALUE=1e-68 ; Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A095UV98|A0A095UV98_9PSED ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas sp. YS-1p
GN=JL38_13695 PE=4 SV=1 ; EVALUE=1e-68 ;
Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|V5T1S0|V5T1S0_PSEAI ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas aeruginosa MTB-1
GN=U769_19450 PE=4 SV=1 ; EVALUE=1e-68 ;
Q/S_length_ratio=0.951"
/note="Pfam_scan:hit_1 (27..134); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:97; HMM_Length:110;
EVALUE:7.2e-11; BITSCORE: 42.1"
/note="Pfam_scan:hit_2 (165..244); Pfam:PF12833.2:HTH_18;
Pfam_type:Domain;HMM_aln_Length:79; HMM_Length:81;
EVALUE:1.6e-18; BITSCORE: 66.5"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MTGSSLVTGL FERLAEPFTA EGVFDCLAGV VYFVKNERAE YVVVNRTLAE RCGTQDKRTL
61 LGKTAAQAFP PPLGRSFWEQ DMQLIASGQP VVNQLELHLY PTGLTGWCLT NKFPLRGSGD
121 TIVGLVGVSH DLHPPNESAE EYNSVAAAVG HARAHLDRRL VTEDLAVIAG LSAYQFDQRV
181 RRLFRLSTGQ LLLKLRMDSA AEQLRDTDSP VVEVGMGCGY ADQSAFTRQF RRTTGMTPGE
241 YRRTFRPLAT DE
//