LOCUS VTR97642.1 768 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1: 4HB_MCP_1:
HAMP: PAS_9: HAMP: MCPsignal protein.
ACCESSION LR593886-6400
PROTEIN_ID VTR97642.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_06150"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.651 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.600 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=1.284"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.556 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-147 ;
Q/S_length_ratio=1.477"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.656 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-146 ; Q/S_length_ratio=0.844"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D7HGU4|D7HGU4_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae RC385
GN=VCRC385_00092 PE=4 SV=1 ; EVALUE=1e-146 ;
Q/S_length_ratio=1.326"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K2VMY6|K2VMY6_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Aerotaxis
transducer Aer2 domain protein OS=Vibrio cholerae HC-55A1
GN=aer2 PE=4 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|C2HT42|C2HT42_VIBAB ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio albensis VL426 GN=VCA_002608
PE=4 SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=1.165"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F2IQ61|F2IQ61_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae LMA3984-4 GN=cheD
PE=4 SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=1.165"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5T0I3|K5T0I3_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Aerotaxis
transducer Aer2 domain protein OS=Vibrio cholerae HC-55B2
GN=aer2 PE=4 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5N429|K5N429_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-61A2 GN=VCHC61A2_0041 PE=4 SV=1 ;
EVALUE=1e-145 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|J1YIE9|J1YIE9_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Aerotaxis
transducer Aer2 domain protein OS=Vibrio cholerae HE-25
GN=aer2 PE=4 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=1.165"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5MIT2|K5MIT2_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-60A1 GN=VCHC60A1_0116 PE=4 SV=1 ;
EVALUE=1e-145 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K5KY81|K5KY81_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-1A2 GN=VCHC1A2_0123 PE=4 SV=1 ;
EVALUE=1e-145 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A085PEP8|A0A085PEP8_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DA89_2479 PE=4 SV=1 ; EVALUE=1e-145
; Q/S_length_ratio=1.428"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K2VD55|K2VD55_VIBCL ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae CP1037(10) GN=VCCP103710_0119 PE=4 SV=1
; EVALUE=1e-144 ; Q/S_length_ratio=1.165"
/note="Pfam_scan:hit_1 (6..189); Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:180; HMM_Length:181;
EVALUE:5.1e-24; BITSCORE: 84.6"
/note="Pfam_scan:hit_2 (196..265); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:70;
EVALUE:2.5e-11; BITSCORE: 43.5"
/note="Pfam_scan:hit_3 (297..401); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:100; HMM_Length:104;
EVALUE:1.5e-15; BITSCORE: 57.3"
/note="Pfam_scan:hit_4 (414..463); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:40; HMM_Length:70;
EVALUE:2.1e-05; BITSCORE: 24.5"
/note="Pfam_scan:hit_5 (518..716);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:1.6e-64; BITSCORE: 217.3"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MTAFNNLGIG TRLIGGFLLL AVASVCVGYF GLKSMSDMNA ALENANSNLI PSINALNDMR
61 GKGVNTIQRN ERTLILSTRS KNEESYRSAA TSLEKAWLSV RDGYTRYESY PMIEKEKQLW
121 GEFRPRLEEF RRDHEATMAA LKAGDLDKAE KLCLGSTANA NKMGDSLDAL IDLQKECGEK
181 DAGDARKEYA AARTTMFVVI GGAVLAAIGL GVFFRGLVVR PLAATVQILQ AVSTGDLTQK
241 ATVTSTDEFG QMGAALNATV QGIHTALQQD KVNWEAVGKQ REQNADFAGQ IAAIGKSQAV
301 IEFKMDGTIV NANENFLRTT GYSLPEIQGR HHSMFVEPSQ ATSSEYRDFW SRLNRGESIA
361 TEFKRVGKGG KEVWIQASYN PIIDLHGKPY KVVKYATDIT AAKQMEHKVK KDATELQQKV
421 AAITTSVSAL AAGDFTQEAP DLGNDEVGQM AAALNKAVVS VRTALEGVRE VSEQLADASG
481 QLSSASDEIS TGAQEQASSL EETASTLEEI TATVRQNSDS AQQARQLASN SKEIAEKGGQ
541 VVGNAVDAMS EINQSSKKIA DIITTIDEIA FQTNLLALNA AVEAARAGEQ GRGFAVVASE
601 VRNLAQRSAT AAKEIKSLIE DSVKKVDAGT ELVNRSGSTL GDIVTSVKRV TDIITEIASA
661 SKEQSTGIDQ VNKAISQMDT VTQRNASQTE EMSATAQTLT DQASQLRDLV ARFKLGHDER
721 PAPKPAHKAA RSKPSNPKPR PAVARAMSNT HELDRLGGGG GDDGFTEF
//