LOCUS VTR97640.1 659 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis protein : Methyl-accepting
chemotaxis sensory transducer OS=Thiorhodospira sibirica
ATCC 700588 GN=ThisiDRAFT_1409 PE=4 SV=1: 4HB_MCP_1: HAMP:
MCPsignal protein.
ACCESSION LR593886-6399
PROTEIN_ID VTR97640.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_06160"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|G4E530|G4E530_9GAMM ;
ALN/Q_length_ratio=0.498 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Thiorhodospira sibirica
ATCC 700588 GN=ThisiDRAFT_1409 PE=4 SV=1 ; EVALUE=3e-99 ;
Q/S_length_ratio=0.905"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5MGA3|D5MGA3_9BACT ;
ALN/Q_length_ratio=0.511 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1726 PE=4 SV=1 ;
EVALUE=5e-99 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5MGA2|D5MGA2_9BACT ;
ALN/Q_length_ratio=0.524 ; DESCRIPTION=Histidine kinase,
HAMP region:chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1 ;
EVALUE=1e-98 ; Q/S_length_ratio=1.160"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5MG94|D5MG94_9BACT ;
ALN/Q_length_ratio=0.448 ; DESCRIPTION=Histidine kinase,
HAMP region:chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1717 PE=4 SV=1 ;
EVALUE=4e-97 ; Q/S_length_ratio=1.150"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q3SIF3|Q3SIF3_THIDA ;
ALN/Q_length_ratio=0.513 ; DESCRIPTION=Chemotaxis sensory
transducer OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_1622 PE=4 SV=1 ; EVALUE=7e-97 ;
Q/S_length_ratio=1.152"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5MGK2|D5MGK2_9BACT ;
ALN/Q_length_ratio=0.478 ; DESCRIPTION=Putative
Methyl-accepting chemotaxis I (Serine chemoreceptor
protein) transmembrane protein OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1825 PE=4 SV=1 ;
EVALUE=6e-95 ; Q/S_length_ratio=1.056"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|T1XER2|T1XER2_VARPD ;
ALN/Q_length_ratio=0.812 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein OS=Variovorax
paradoxus B4 GN=VAPA_1c43410 PE=4 SV=1 ; EVALUE=2e-94 ;
Q/S_length_ratio=1.225"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|C5CXU6|C5CXU6_VARPS ;
ALN/Q_length_ratio=0.848 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Variovorax paradoxus
(strain S110) GN=Vapar_4189 PE=4 SV=1 ; EVALUE=5e-94 ;
Q/S_length_ratio=1.179"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I2IQ28|I2IQ28_9BURK ;
ALN/Q_length_ratio=0.464 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Burkholderia sp. Ch1-1
GN=BCh11DRAFT_00568 PE=4 SV=1 ; EVALUE=5e-92 ;
Q/S_length_ratio=1.086"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q3SIF6|Q3SIF6_THIDA ;
ALN/Q_length_ratio=0.511 ; DESCRIPTION=Chemotaxis sensory
transducer OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_1619 PE=4 SV=1 ; EVALUE=1e-91 ;
Q/S_length_ratio=1.179"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A4G873|A4G873_HERAR ;
ALN/Q_length_ratio=0.511 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein OS=Herminiimonas
arsenicoxydans GN=HEAR2588 PE=4 SV=1 ; EVALUE=3e-91 ;
Q/S_length_ratio=1.166"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M7P1D5|M7P1D5_9GAMM ;
ALN/Q_length_ratio=0.543 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Methylophaga lonarensis MPL
GN=MPL1_06139 PE=3 SV=1 ; EVALUE=1e-90 ;
Q/S_length_ratio=0.812"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q3SL08|Q3SL08_THIDA ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Chemotaxis sensory
transducer OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_0660 PE=4 SV=1 ; EVALUE=4e-90 ;
Q/S_length_ratio=1.125"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q93ET6|Q93ET6_RAHAQ ;
ALN/Q_length_ratio=0.495 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein I OS=Rahnella
aquatilis PE=4 SV=1 ; EVALUE=7e-90 ;
Q/S_length_ratio=1.190"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|X4BBU3|X4BBU3_SALEN ;
ALN/Q_length_ratio=0.484 ; DESCRIPTION=Chemotaxis protein
(Fragment) OS=Salmonella enterica subsp. enterica serovar
Enteritidis str. EC20120697 GN=AV31_24445 PE=4 SV=1 ;
EVALUE=7e-90 ; Q/S_length_ratio=1.985"
/note="Pfam_scan:hit_1 (6..184); Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:180; HMM_Length:181;
EVALUE:8e-27; BITSCORE: 93.7"
/note="Pfam_scan:hit_2 (191..260); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:66; HMM_Length:70;
EVALUE:7.2e-12; BITSCORE: 45.3"
/note="Pfam_scan:hit_3 (410..608);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:1.3e-63; BITSCORE: 214.4"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0004871"
BEGIN
1 MSWFRNLKMA AKLGISFAVL VLLVACTGGL GLHGLGQVND RAADIAKHAD GLNHVQEANG
61 ELLRISRAVR NAILDADAAS IDKRAADIRQ ADKRFRTEFE EYRQTIVKSD TKTKAAEVER
121 QFNELRPLQD EIVALARAQK DEEAKARLPR IRAIADSMEE KINALVESKQ ELIKQAQTDA
181 STTYAQLRGV VTAVVVGACV LAIALGVTLS RLTAGPLQKT MHVLEAVAKG DLTHRAEAKS
241 TDEIGQMSAA LNVAIGALVA AKEAERVQVE KDRERAAREA AEARERTERE AAATRAQAEL
301 ERAQANELKN RIDTIITTVS SLAAGDFTQQ IPDLGSDSVG QMANSLNKAV VSVRTALEGV
361 REVSEQLADA SGQLSAASDE ISTGAQEQAS SLEETASTLE EITATVRQNS DSAQQARQLA
421 SSSKDIAEKG GQVVGNAVEA MSEINQSSKK IADIITTIDE IAFQTNLLAL NAAVEAARAG
481 EQGRGFAVVA SEVRNLAQRS ATAAKEIKSL IEDSVKKVDA GTELVNLSGS TLGDIVTSVK
541 RVTDLITEIA AAGKEQSVGI EQVNKAVSQM DSVTQRNASQ TEEMSATAQT LTDQAAQLRD
601 LVARFKLSEE RRSAPRPASK GVRSKAPTTK PRPAVTRALN ASRERDPFDG AGNDGFTEF
//