LOCUS VTR97574.1 442 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-directed dna polymerase : Reverse
transcriptase (RNA-dependent DNA polymerase) OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_3415 PE=4 SV=1: RVT_1 protein.
ACCESSION LR593886-6366
PROTEIN_ID VTR97574.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_06490"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DG75|L0DG75_SINAD ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Reverse
transcriptase (RNA-dependent DNA polymerase)
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_3415 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|U3A739|U3A739_9VIBR ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Putative
RNA-directed DNA polymerase OS=Vibrio azureus NBRC 104587
GN=VAZ01S_031_00140 PE=4 SV=1 ; EVALUE=1e-160 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|U4T817|U4T817_9GAMM ;
ALN/Q_length_ratio=1.007 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Psychrobacter aquaticus CMS
56 GN=M917_2761 PE=4 SV=1 ; EVALUE=1e-158 ;
Q/S_length_ratio=0.911"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|W6M3S2|W6M3S2_9GAMM ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Putative
RNA-directed DNA polymerase OS=Candidatus Competibacter
denitrificans Run_A_D11 GN=BN873_1070006 PE=4 SV=1 ;
EVALUE=1e-143 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H8MWH1|H8MWH1_CORCM ;
ALN/Q_length_ratio=1.032 ; DESCRIPTION=RNA-directed DNA
polymerase domain-containing protein OS=Corallococcus
coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 /
M2) GN=COCOR_07916 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.925"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A085XBW8|A0A085XBW8_9DELT ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Enhygromyxa salina
GN=DB30_3807 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A084STE4|A0A084STE4_9DELT ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA polymerase
OS=Cystobacter violaceus Cb vi76 GN=Q664_20045 PE=4 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.932"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A085WL81|A0A085WL81_9DELT ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Hyalangium minutum
GN=DB31_7681 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A017T1K8|A0A017T1K8_9DELT ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Chondromyces apiculatus DSM
436 GN=CAP_7063 PE=4 SV=1 ; EVALUE=1e-140 ;
Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|U2U1E9|U2U1E9_9DELT ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase protein OS=Myxococcus sp.
(contaminant ex DSM 436) GN=A176_07381 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=0.913"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A9FPL9|A9FPL9_SORC5 ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Sorangium cellulosum (strain So ce56)
GN=sce1914 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=0.884"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F8CE57|F8CE57_MYXFH ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=RNA-directed DNA
polymerase domain-containing protein OS=Myxococcus fulvus
(strain ATCC BAA-855 / HW-1) GN=LILAB_08025 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=0.911"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q50210|Q50210_9DELT ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Reverse
transcriptase OS=Melittangium lichenicola PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=0.919"
/note="BLAST_uniprot:hit_14 ; ACCESSION=P23072 ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=RNA-directed DNA
polymerase from retron Mx162-RT OS=Myxococcus xanthus PE=3
SV=1 ; EVALUE=1e-136 ; Q/S_length_ratio=0.911"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L7TZS8|L7TZS8_MYXSD ;
ALN/Q_length_ratio=0.998 ; DESCRIPTION=RNA-directed DNA
polymerase domain-containing protein OS=Myxococcus
stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)
GN=MYSTI_00119 PE=4 SV=1 ; EVALUE=1e-135 ;
Q/S_length_ratio=0.909"
/note="Pfam_scan:hit_1 (155..370); Pfam:PF00078.22:RVT_1;
Pfam_type:Family;HMM_aln_Length:212; HMM_Length:214;
EVALUE:5.2e-27; BITSCORE: 94.6"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="Enzyme_Code:EC:2.7.7.49"
BEGIN
1 MSTTTPAPSP DAQTLWRLIV QAGGMKAYID GQLRERGFLV TRRDADAMSD REKDTYKKAL
61 KQEAEERRKL RRETWGAYRA NHIVHLGEGV FWTDEPKEDK WDTPNSEERA AENELPALDK
121 AEQLAEALGV TIPQLKGMAY HRDAATSLHY VRFTIPKRDG TERPIWAPKK RLKAAQRWIL
181 HHIVERLPVH GAAQGFLVGR SILSNALVHE NPKILLKMDI KEFFPTVTVK RVKGVFRRAG
241 YRDGISTLLA QICTEAPREI VNVEGKTYYV SLGPRCLPQG APTSPAITNA LCLRLDRRLA
301 GLAKRYGWRY TRYADDLTFS LPMDHKGPPK LGSMLGCARR IVESEGFEVK TEKTRVHRSG
361 GRQSVTGLVV NGDSSPRTPR KLRRQLRSAL HKLKTGKPLK DGESLARLTG YAAFVYMTNP
421 DLGRKLLADL QGFEGKPEGP AV
//