LOCUS VTR97566.1 607 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana arginyl-trna synthetase : Arginine-
-tRNA ligase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=argS PE=
3 SV=1: Arg_tRNA_synt_N: tRNA-synt_1d: DALR_1 protein.
ACCESSION LR593886-6362
PROTEIN_ID VTR97566.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_06530"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DKC6|L0DKC6_SINAD ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Arginine--tRNA
ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=argS PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B2UPU8|B2UPU8_AKKM8 ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Arginine--tRNA
ligase OS=Akkermansia muciniphila (strain ATCC BAA-835)
GN=argS PE=3 SV=1 ; EVALUE=1e-162 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|R7DST6|R7DST6_9BACT ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Arginine--tRNA
ligase OS=Akkermansia sp. CAG:344 GN=argS PE=3 SV=1 ;
EVALUE=1e-161 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A090KH24|A0A090KH24_9BACT ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Arginine--tRNA
ligase OS=uncultured bacterium GN=argS PE=3 SV=1 ;
EVALUE=1e-161 ; Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|R6JBR5|R6JBR5_9BACT ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Arginine--tRNA
ligase OS=Akkermansia muciniphila CAG:154 GN=argS PE=3
SV=1 ; EVALUE=1e-160 ; Q/S_length_ratio=0.932"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B4D6N9|B4D6N9_9BACT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Arginine--tRNA
ligase OS=Chthoniobacter flavus Ellin428 GN=argS PE=3 SV=1
; EVALUE=1e-152 ; Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|I3I9C5|I3I9C5_9GAMM ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Arginine--tRNA
ligase OS=Cellvibrio sp. BR GN=argS PE=3 SV=1 ;
EVALUE=1e-145 ; Q/S_length_ratio=1.048"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A9F5R2|A9F5R2_SORC5 ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Arginine--tRNA
ligase OS=Sorangium cellulosum (strain So ce56) GN=argS
PE=3 SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I0JW04|I0JW04_9BACT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Arginine--tRNA
ligase OS=Methylacidiphilum fumariolicum SolV GN=argS PE=3
SV=1 ; EVALUE=1e-143 ; Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F2BCM3|F2BCM3_9NEIS ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Arginine--tRNA
ligase OS=Neisseria bacilliformis ATCC BAA-1200 GN=argS
PE=3 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K9VIB3|K9VIB3_9CYAN ;
ALN/Q_length_ratio=0.954 ; DESCRIPTION=Arginine--tRNA
ligase OS=Oscillatoria nigro-viridis PCC 7112 GN=argS PE=3
SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D9V944|D9V944_9ACTO ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=Arginine--tRNA
ligase OS=Streptomyces sp. AA4 GN=argS PE=3 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D0W927|D0W927_NEILA ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Arginine--tRNA
ligase OS=Neisseria lactamica ATCC 23970 GN=argS PE=3 SV=1
; EVALUE=1e-140 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F4AN75|F4AN75_GLAS4 ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Arginine--tRNA
ligase OS=Glaciecola sp. (strain 4H-3-7+YE-5) GN=argS PE=3
SV=1 ; EVALUE=1e-140 ; Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H2J4W9|H2J4W9_MARPK ;
ALN/Q_length_ratio=0.891 ; DESCRIPTION=Arginine--tRNA
ligase OS=Marinitoga piezophila (strain DSM 14283 / JCM
11233 / KA3) GN=argS PE=3 SV=1 ; EVALUE=1e-140 ;
Q/S_length_ratio=1.069"
/note="Pfam_scan:hit_1 (5..91);
Pfam:PF03485.11:Arg_tRNA_synt_N;
Pfam_type:Domain;HMM_aln_Length:83; HMM_Length:85;
EVALUE:1.4e-18; BITSCORE: 67.2"
/note="Pfam_scan:hit_2 (99..474);
Pfam:PF00750.14:tRNA-synt_1d;
Pfam_type:Family;HMM_aln_Length:339; HMM_Length:354;
EVALUE:1.3e-73; BITSCORE: 247.8"
/note="Pfam_scan:hit_3 (488..607); Pfam:PF05746.10:DALR_1;
Pfam_type:Domain;HMM_aln_Length:118; HMM_Length:119;
EVALUE:5.1e-32; BITSCORE: 110.3"
/note="GO_domain:GO:0005737"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0006399"
/note="GO_domain:GO:0006520"
/note="GO_domain:GO:0016874"
/note="GO_domain:GO:0006412"
/note="Enzyme_Code:EC:6.1.1"
/note="Enzyme_Code:EC:6.1.1.19"
BEGIN
1 MNLLTQIRSL FEPALAALAP DQAKVPDLLA AIKPASNADH GDYQANCAMA LGKALGQKPQ
61 DVAKALIAAL PANDVLEPPT VAGPGFINLR LKPDFLAKAI AEIATDPKLG VEPTKKPKTF
121 VIDLSGPNVA KPLHVGHLRS TIIGDALVRI LRFLGHTVIG DNHLGDWGTQ FGILLYGYKH
181 HRDDAAFTAD PVRELARLYV HVRGLAAVAE GEDEDGAGDN PIMTACREET SRLHAGDPEN
241 VALWETFMPA CLEMLRPIYE RLNVKIDHAL GESFYNPMLA CVVDDMLAKK IAFESKGAVV
301 IPNAKGVVPQ TEEEQKKEEP PAIIRKRDGA FTYTTTDLAT VQYRAETWKP DVMLYVVGAP
361 QALHFKTIFA QARRWGYADV DFQHVQFGSM LGKDRKIFST RKGGVIELMS LLDDAARLGL
421 QKYEENSAAR RAVGHKVFEP TDAEKREIAE VVGTGAVKYA DLSQNRTTDY VFDIEKMTGT
481 DGNTAAYMQY AYARCRAIFR EGEIDTARFR THPPAVVISH NAERLLALQL LRFPEVVDSA
541 VADYVPHLLT TYLWDVAKSY SGFYENCPVL KAESPELKDS RLLLVDLVSR VIKQAIDLLG
601 IRVVERM
//