LOCUS VTR97564.1 137 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana iojap-related protein : Ribosomal silencing
factor RsfS OS=Blastopirellula marina DSM 3645 GN=rsfS
PE=3 SV=1: Oligomerisation protein.
ACCESSION LR593886-6361
PROTEIN_ID VTR97564.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_06540"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZLR7|A3ZLR7_9PLAN ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Blastopirellula marina DSM 3645 GN=rsfS
PE=3 SV=1 ; EVALUE=1e-39 ; Q/S_length_ratio=0.895"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SS65|F0SS65_PLABD ;
ALN/Q_length_ratio=0.832 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=rsfS PE=3 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=0.820"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5U512|M5U512_9PLAN ;
ALN/Q_length_ratio=0.861 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula sallentina SM41 GN=rsfS PE=3
SV=1 ; EVALUE=5e-36 ; Q/S_length_ratio=0.737"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5T9L7|M5T9L7_9PLAN ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula sp. SWK7 GN=rsfS PE=3 SV=1 ;
EVALUE=5e-35 ; Q/S_length_ratio=0.815"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F2AMD6|F2AMD6_RHOBT ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula baltica WH47 GN=rsfS PE=3
SV=1 ; EVALUE=5e-35 ; Q/S_length_ratio=0.811"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5DBK6|K5DBK6_RHOBT ;
ALN/Q_length_ratio=0.839 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula baltica SH28 GN=rsfS PE=3
SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CKM8|L7CKM8_RHOBT ;
ALN/Q_length_ratio=0.839 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula baltica SWK14 GN=rsfS PE=3
SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M2ARV2|M2ARV2_9PLAN ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula europaea 6C GN=rsfS PE=3
SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=0.617"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5SRX2|M5SRX2_9PLAN ;
ALN/Q_length_ratio=0.839 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula europaea SH398 GN=rsfS PE=3
SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q7URC6|Q7URC6_RHOBA ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula baltica (strain SH1) GN=rsfS
PE=3 SV=1 ; EVALUE=7e-34 ; Q/S_length_ratio=0.733"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E8R1R1|E8R1R1_ISOPI ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rsfS PE=3 SV=1 ; EVALUE=2e-33 ;
Q/S_length_ratio=0.555"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L0DJT1|L0DJT1_SINAD ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rsfS PE=3
SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=0.668"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5RSU9|M5RSU9_9PLAN ;
ALN/Q_length_ratio=0.796 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Rhodopirellula maiorica SM1 GN=rsfS PE=3
SV=1 ; EVALUE=6e-33 ; Q/S_length_ratio=0.787"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D9S2B0|D9S2B0_THEOJ ;
ALN/Q_length_ratio=0.766 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Thermosediminibacter oceani (strain ATCC
BAA-1034 / DSM 16646 / JW/IW-1228P) GN=rsfS PE=3 SV=1 ;
EVALUE=5e-29 ; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D2R8D5|D2R8D5_PIRSD ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Ribosomal silencing
factor RsfS OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=rsfS PE=3 SV=1 ; EVALUE=8e-28 ;
Q/S_length_ratio=1.022"
/note="Pfam_scan:hit_1 (27..125);
Pfam:PF02410.10:Oligomerisation;
Pfam_type:Family;HMM_aln_Length:95; HMM_Length:100;
EVALUE:5.6e-29; BITSCORE: 100.1"
/note="GO_domain:GO:0006412"
BEGIN
1 MNTATLNTVS TVPAPHSARP ISSALHRACL AARTIADNKG RDILVLDLRP CTPLFDYFII
61 ATGASRRQIH TLAEETDAAL RAEGDTRLGI EGYEASKWIV QDYGDIVIHV FDPDTRDYYK
121 LEELWADAIK VDWEHED
//