LOCUS VTR97437.1 146 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 16s rrna maturation rnase : Endoribonuclease
YbeY OS=uncultured planctomycete GN=ybeY PE=3 SV=1: UPF0054
protein.
ACCESSION LR593886-6297
PROTEIN_ID VTR97437.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_07180"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SCD2|H5SCD2_9BACT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Endoribonuclease
YbeY OS=uncultured planctomycete GN=ybeY PE=3 SV=1 ;
EVALUE=2e-31 ; Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SRT7|F0SRT7_PLABD ;
ALN/Q_length_ratio=0.897 ; DESCRIPTION=Endoribonuclease
YbeY OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM
5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=ybeY PE=3
SV=1 ; EVALUE=4e-25 ; Q/S_length_ratio=0.901"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DNR0|L0DNR0_SINAD ;
ALN/Q_length_ratio=0.849 ; DESCRIPTION=Endoribonuclease
YbeY OS=Singulisphaera acidiphila (strain ATCC BAA-1392 /
DSM 18658 / VKM B-2454 / MOB10) GN=ybeY PE=3 SV=1 ;
EVALUE=1e-24 ; Q/S_length_ratio=0.839"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5U645|M5U645_9PLAN ;
ALN/Q_length_ratio=0.870 ; DESCRIPTION=Endoribonuclease
YbeY OS=Rhodopirellula sallentina SM41 GN=ybeY PE=3 SV=1 ;
EVALUE=2e-24 ; Q/S_length_ratio=0.936"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|X1E422|X1E422_9ZZZZ ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_L00075 OS=marine sediment
metagenome GN=S03H2_09924 PE=3 SV=1 ; EVALUE=8e-23 ;
Q/S_length_ratio=0.936"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZXV2|A3ZXV2_9PLAN ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Endoribonuclease
YbeY OS=Blastopirellula marina DSM 3645 GN=ybeY PE=3 SV=1
; EVALUE=4e-22 ; Q/S_length_ratio=0.885"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6CBK1|A6CBK1_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Endoribonuclease
YbeY OS=Planctomyces maris DSM 8797 GN=ybeY PE=3 SV=1 ;
EVALUE=7e-22 ; Q/S_length_ratio=0.885"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|S7VZ06|S7VZ06_9FLAO ;
ALN/Q_length_ratio=0.904 ; DESCRIPTION=Endoribonuclease
YbeY OS=Winogradskyella psychrotolerans RS-3 GN=ybeY PE=3
SV=1 ; EVALUE=7e-22 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|C6CTU9|C6CTU9_PAESJ ;
ALN/Q_length_ratio=0.904 ; DESCRIPTION=Endoribonuclease
YbeY OS=Paenibacillus sp. (strain JDR-2) GN=ybeY PE=3 SV=1
; EVALUE=8e-22 ; Q/S_length_ratio=0.885"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5TJ77|M5TJ77_9PLAN ;
ALN/Q_length_ratio=0.678 ; DESCRIPTION=Endoribonuclease
YbeY OS=Rhodopirellula sp. SWK7 GN=ybeY PE=3 SV=1 ;
EVALUE=9e-22 ; Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F4AVJ1|F4AVJ1_DOKS4 ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Endoribonuclease
YbeY OS=Dokdonia sp. (strain 4H-3-7-5) GN=ybeY PE=3 SV=1 ;
EVALUE=6e-21 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F9YVE4|F9YVE4_CAPCC ;
ALN/Q_length_ratio=0.897 ; DESCRIPTION=Endoribonuclease
YbeY OS=Capnocytophaga canimorsus (strain 5) GN=ybeY PE=3
SV=1 ; EVALUE=7e-21 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D9QVA2|D9QVA2_ACEAZ ;
ALN/Q_length_ratio=0.808 ; DESCRIPTION=Endoribonuclease
YbeY OS=Acetohalobium arabaticum (strain ATCC 49924 / DSM
5501 / Z-7288) GN=ybeY PE=3 SV=1 ; EVALUE=1e-20 ;
Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q1PYE3|Q1PYE3_9BACT ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Endoribonuclease
YbeY OS=Candidatus Kuenenia stuttgartiensis GN=ybeY PE=3
SV=1 ; EVALUE=2e-20 ; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F6CMU2|F6CMU2_DESK7 ;
ALN/Q_length_ratio=0.795 ; DESCRIPTION=Endoribonuclease
YbeY OS=Desulfotomaculum kuznetsovii (strain DSM 6115 /
VKM B-1805 / 17) GN=ybeY PE=3 SV=1 ; EVALUE=2e-20 ;
Q/S_length_ratio=0.961"
/note="Pfam_scan:hit_1 (5..139); Pfam:PF02130.12:UPF0054;
Pfam_type:Family;HMM_aln_Length:131; HMM_Length:145;
EVALUE:1.2e-34; BITSCORE: 118.6"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0008233"
/note="GO_domain:GO:0034641"
/note="Enzyme_Code:EC:3.4.24"
BEGIN
1 MIRVSVANPY EYPLEFQQLK DAARTVLEGE GTKAGKVTLA FVDNPHIHRL NKQFLDHDEP
61 TDVLTFPYTD PGAKTLEGEV VIGYEVAKEY AADRNHETNL ELLLYVVHGC LHLCGYTDTD
121 DKGEREMRAK EREYLTKLGL PDIAGG
//