LOCUS VTR97404.1 773 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna-binding protein smubp-2 : DNA-binding
protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_25482
PE=4 SV=1: DbpA: AAA_11: AAA_12 protein.
ACCESSION LR593886-6280
PROTEIN_ID VTR97404.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_07350"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A4A0G4|A4A0G4_9PLAN ;
ALN/Q_length_ratio=0.587 ; DESCRIPTION=DNA-binding protein
OS=Blastopirellula marina DSM 3645 GN=DSM3645_25482 PE=4
SV=1 ; EVALUE=1e-170 ; Q/S_length_ratio=1.125"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5TZK6|M5TZK6_9PLAN ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula sallentina SM41 GN=RSSM_04059
PE=4 SV=1 ; EVALUE=1e-165 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5SYG0|M5SYG0_9PLAN ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula sp. SWK7 GN=RRSWK_05674 PE=4
SV=1 ; EVALUE=1e-164 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L7CN46|L7CN46_RHOBT ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula baltica SWK14 GN=RBSWK_00755
PE=4 SV=1 ; EVALUE=1e-162 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F2AV06|F2AV06_RHOBT ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula baltica WH47 GN=RBWH47_03586
PE=4 SV=1 ; EVALUE=1e-162 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q7UWP1|Q7UWP1_RHOBA ;
ALN/Q_length_ratio=0.853 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula baltica (strain SH1) GN=RB1895
PE=4 SV=1 ; EVALUE=1e-161 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5CDE3|K5CDE3_RHOBT ;
ALN/Q_length_ratio=0.853 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula baltica SH28 GN=RBSH_02996 PE=4
SV=1 ; EVALUE=1e-160 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M2BBK7|M2BBK7_9PLAN ;
ALN/Q_length_ratio=0.853 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula europaea 6C GN=RE6C_00141 PE=4
SV=1 ; EVALUE=1e-160 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5RVS7|M5RVS7_9PLAN ;
ALN/Q_length_ratio=0.853 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula europaea SH398 GN=RESH_06007
PE=4 SV=1 ; EVALUE=1e-160 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D2QWB1|D2QWB1_PIRSD ;
ALN/Q_length_ratio=0.582 ; DESCRIPTION=AAA ATPase
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_1309 PE=4 SV=1 ; EVALUE=1e-159 ;
Q/S_length_ratio=1.210"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5RCE3|M5RCE3_9PLAN ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=DNA-binding protein
SMUBP-2 OS=Rhodopirellula maiorica SM1 GN=RMSM_06025 PE=4
SV=1 ; EVALUE=1e-157 ; Q/S_length_ratio=1.169"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B4UIX9|B4UIX9_ANASK ;
ALN/Q_length_ratio=0.737 ; DESCRIPTION=Superfamily I DNA
and RNA helicase OS=Anaeromyxobacter sp. (strain K)
GN=AnaeK_4348 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.243"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B8JBT0|B8JBT0_ANAD2 ;
ALN/Q_length_ratio=0.737 ; DESCRIPTION=Superfamily I DNA
and RNA helicase OS=Anaeromyxobacter dehalogenans (strain
2CP-1 / ATCC BAA-258) GN=A2cp1_4371 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.243"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q2IHB9|Q2IHB9_ANADE ;
ALN/Q_length_ratio=0.572 ; DESCRIPTION=Superfamily I DNA
and RNA helicase OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=Adeh_4216 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.249"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A084SL85|A0A084SL85_9DELT ;
ALN/Q_length_ratio=0.585 ; DESCRIPTION=ATPase AAA
OS=Cystobacter violaceus Cb vi76 GN=Q664_36450 PE=4 SV=1 ;
EVALUE=1e-132 ; Q/S_length_ratio=1.208"
/note="Pfam_scan:hit_1 (12..74); Pfam:PF03880.10:DbpA;
Pfam_type:Domain;HMM_aln_Length:59; HMM_Length:74;
EVALUE:1.1e-05; BITSCORE: 24.9"
/note="Pfam_scan:hit_2 (321..541); Pfam:PF13086.1:AAA_11;
Pfam_type:Domain;HMM_aln_Length:234; HMM_Length:236;
EVALUE:3.2e-52; BITSCORE: 177.4"
/note="Pfam_scan:hit_3 (548..744); Pfam:PF13087.1:AAA_12;
Pfam_type:Domain;HMM_aln_Length:197; HMM_Length:200;
EVALUE:6.1e-54; BITSCORE: 182.4"
/note="GO_domain:GO:0003674"
BEGIN
1 MALIHIDPVP PRCSPGVVLS FVCTGGKLDS KHIGKIAFVG RGATVEVPDA KAAALVNALD
61 GATLQAKPVR VRFAGKADFT DANHLANLSN LLDLEAKAEQ EEARRRAQAE EGSPVGDGTT
121 LTKLVLRDSE FGLGGRLLLT FGRKTLNEAL PPSRLGPGSP VVLNQTNVNR RMPSYRGVIY
181 DRDTATIGVA IDPPDDELSD EAVWRLDLSP DEVSRLRQQD ALRRAASATG DRLAELRDVL
241 LGEQRQPNPL TPFPKKEGGT EPNTENTNLS VPVLSPSPLG GGVGEGFFSP FPSGRGDGGV
301 GSANDSPFLE GEGTGGDSAL ALNPPQRAAV EFALAAKDFA IIHGPPGTGK TTTVVEFIRE
361 AVARGDTVLA CAPSNHAVDN LLEKLLAVGE LPVRLGHPAR VMPELRARAI DILAEKHPDA
421 RQARKIARDA FALFRQADKW TREKPQPGEK AALRREARDM LGEARKLEAL AVERVLDEAK
481 IICATLTGLD SQLLGQRRFD IAVIDEACQS TEPAAWVPLL RANKLILAGD HCQLPPTIIS
541 PEAAERGLAI SLMERLVRQF GPDVSRLLTV QHRMNAAIMG FSNQEFYDGN LIAHESVAGH
601 RLCDLPNVTT DPLTETPVQF IDTAGASYDE ELEEDTGSRR NVQEASLAVK KVRALLAAGV
661 EASQIGIITP YRAQVRLLRE RIGDVPGLEI DSVDGFQGRE KEAIVVSLVR SNNEGEIGFL
721 ADTRRTNVAL TRARRKLLVI GDSATLANDP FYQRMLTYFE EIGAMSSVWE ETE
//