LOCUS VTR97392.1 477 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana two sigma54 transcriptional fis family
: Response regulator with CheY-like receiver, AAA-type
ATPase, and DNA-binding domains OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7096 PE=4 SV=1: Response_reg: Sigma54_activat:
HTH_8 protein.
ACCESSION LR593886-6274
PROTEIN_ID VTR97392.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_07410"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DQH1|L0DQH1_SINAD ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7096 PE=4 SV=1
; EVALUE=1e-148 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R4P1|D2R4P1_PIRSD ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_2438 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5UI67|M5UI67_9PLAN ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula sallentina SM41 GN=RSSM_02870 PE=4 SV=1
; EVALUE=1e-131 ; Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5T0I1|M5T0I1_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula sp. SWK7 GN=RRSWK_04774 PE=4 SV=1 ;
EVALUE=1e-128 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6C862|A6C862_9PLAN ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Planctomyces maris DSM 8797
GN=PM8797T_07684 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZXP8|A3ZXP8_9PLAN ;
ALN/Q_length_ratio=0.954 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Blastopirellula marina DSM 3645
GN=DSM3645_07430 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B8FIF0|B8FIF0_DESAA ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Two-component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfatibacillum alkenivorans (strain AK-01)
GN=Dalk_2247 PE=4 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|R4KH14|R4KH14_9FIRM ;
ALN/Q_length_ratio=0.933 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Desulfotomaculum gibsoniae DSM 7213
GN=Desgi_1445 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E1YLZ0|E1YLZ0_9DELT ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein atoC OS=uncultured
Desulfobacterium sp. GN=N47_E46350 PE=4 SV=1 ;
EVALUE=1e-121 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5R763|M5R763_9PLAN ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula maiorica SM1 GN=RMSM_07767 PE=4 SV=1 ;
EVALUE=1e-120 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q7UJV2|Q7UJV2_RHOBA ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Rhodopirellula baltica (strain SH1)
GN=ntrC PE=4 SV=1 ; EVALUE=1e-119 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M2A855|M2A855_9PLAN ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Rhodopirellula europaea 6C GN=RE6C_01415
PE=4 SV=1 ; EVALUE=1e-119 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5RWH1|M5RWH1_9PLAN ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Nitrogen metabolism
transcriptional regulator, NtrC, Fis family
OS=Rhodopirellula europaea SH398 GN=RESH_05716 PE=4 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2AVA0|F2AVA0_RHOBT ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula baltica WH47 GN=RBWH47_01755 PE=4 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L7CAU5|L7CAU5_RHOBT ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula baltica SWK14 GN=RBSWK_04876 PE=4 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=1.015"
/note="Pfam_scan:hit_1 (5..115);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:112;
EVALUE:3.6e-26; BITSCORE: 91.3"
/note="Pfam_scan:hit_2 (144..311);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:167; HMM_Length:168;
EVALUE:1.7e-64; BITSCORE: 216.3"
/note="Pfam_scan:hit_3 (426..467); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42;
EVALUE:7.4e-05; BITSCORE: 22.2"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MPHSVLIIDD EEPIAWTLRR AFEREKHRVS VAATAEDGLM KARQSAPDLV FLDVRLPGMD
61 GLTALGEIKK VAPSAAVVVI TAHGNLNTAV KAVEGGAFDY LAKPFELAQA LDAANRALVD
121 RDTPGNSGIL GSALAEVDSS PDAIIGRSPT MQTVFKRIAM VAPTNACVLV TGESGTGKEL
181 VARAIHANSP RRHKPLLAAH VAAYNTNLVE SELFGHIKGA FTGAERARDG LMKLADGGTV
241 FLDELADIPL PVQAKLLRVL ERQEVQPVGG SESQVVDVRV VSATHADLSA AVREGKFRHD
301 LFFRLNVYPI HLPPLRDRVD DIPLLAEHFL RKFGVPNPGS AVPAETLAFL KSRPWPGNVR
361 ELRNALEHAA IEARGAALRP EHFPDPSTAA GPASTPERLR SLVTEWVREQ VQALEGREPA
421 DLHQTLIDAI EPAVLDEVLR QVDGNRLVAA RWLGLARATV RKLIRKYHPD TAEPDED
//