LOCUS VTR97351.1 244 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana ribonuclease iii : Ribonuclease 3 OS=
Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=rnc PE=3 SV=1: Ribonucleas_3_3:
dsrm protein.
ACCESSION LR593886-6251
PROTEIN_ID VTR97351.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_07640"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DBQ7|L0DBQ7_SINAD ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Ribonuclease 3
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=rnc PE=3 SV=1 ;
EVALUE=2e-89 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|H5SII4|H5SII4_9BACT ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Ribonuclease 3
OS=uncultured planctomycete GN=rnc PE=3 SV=1 ;
EVALUE=4e-89 ; Q/S_length_ratio=0.972"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2QZC7|D2QZC7_PIRSD ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Ribonuclease 3
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=rnc PE=3 SV=1 ; EVALUE=1e-88 ;
Q/S_length_ratio=0.894"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|X0V7P9|X0V7P9_9ZZZZ ;
ALN/Q_length_ratio=0.869 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S22734 (Fragment) OS=marine
sediment metagenome GN=S01H1_57513 PE=3 SV=1 ;
EVALUE=3e-85 ; Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8R1J8|E8R1J8_ISOPI ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Ribonuclease 3
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=rnc PE=3 SV=1 ; EVALUE=3e-78 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZZV1|A3ZZV1_9PLAN ;
ALN/Q_length_ratio=0.914 ; DESCRIPTION=Ribonuclease 3
OS=Blastopirellula marina DSM 3645 GN=rnc PE=3 SV=1 ;
EVALUE=1e-76 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F0SJD2|F0SJD2_PLABD ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Ribonuclease 3
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=rnc PE=3 SV=1 ;
EVALUE=8e-73 ; Q/S_length_ratio=0.728"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5RAY8|M5RAY8_9PLAN ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Ribonuclease 3
OS=Rhodopirellula maiorica SM1 GN=rnc PE=3 SV=1 ;
EVALUE=2e-72 ; Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D5SNS8|D5SNS8_PLAL2 ;
ALN/Q_length_ratio=0.922 ; DESCRIPTION=Ribonuclease 3
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=rnc PE=3 SV=1 ; EVALUE=3e-72 ;
Q/S_length_ratio=0.928"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A6C1C3|A6C1C3_9PLAN ;
ALN/Q_length_ratio=0.889 ; DESCRIPTION=Ribonuclease 3
OS=Planctomyces maris DSM 8797 GN=rnc PE=3 SV=1 ;
EVALUE=3e-72 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K5D7W9|K5D7W9_RHOBT ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Ribonuclease 3
OS=Rhodopirellula baltica SH28 GN=rnc PE=3 SV=1 ;
EVALUE=7e-72 ; Q/S_length_ratio=0.917"
/note="BLAST_uniprot:hit_11 ; ACCESSION=Q7UGZ7 ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Ribonuclease 3
OS=Rhodopirellula baltica (strain SH1) GN=rnc PE=3 SV=2 ;
EVALUE=7e-72 ; Q/S_length_ratio=0.917"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5SPD2|M5SPD2_9PLAN ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Ribonuclease 3
OS=Rhodopirellula europaea SH398 GN=rnc PE=3 SV=1 ;
EVALUE=2e-71 ; Q/S_length_ratio=0.824"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L7C907|L7C907_RHOBT ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Ribonuclease 3
OS=Rhodopirellula baltica SWK14 GN=rnc PE=3 SV=1 ;
EVALUE=2e-71 ; Q/S_length_ratio=0.822"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2AXZ2|F2AXZ2_RHOBT ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Ribonuclease 3
OS=Rhodopirellula baltica WH47 GN=rnc PE=3 SV=1 ;
EVALUE=2e-71 ; Q/S_length_ratio=0.822"
/note="Pfam_scan:hit_1 (29..156);
Pfam:PF14622.1:Ribonucleas_3_3;
Pfam_type:Family;HMM_aln_Length:125; HMM_Length:128;
EVALUE:8.1e-32; BITSCORE: 109.8"
/note="Pfam_scan:hit_2 (168..234); Pfam:PF00035.20:dsrm;
Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:67;
EVALUE:1.6e-11; BITSCORE: 44.6"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0034655"
/note="Enzyme_Code:EC:3.1.30"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:3.1.26"
/note="Enzyme_Code:EC:3.1.26.3"
BEGIN
1 MPPSDTLTNN RERTVLENCQ EAIGYRFLKP ELLRSALTHT SSANTRAASN ERLEFLGDSV
61 LGLVTCEQLY QRFPEYQEGD LTKVKSAVVS RKTCARFSQE IGLGDFLFLG RGVHTHGEMP
121 LNILANVFES LVAAIFLDGG WGAAREFILR FITPEVERVA RDAISSNAKS QLQTVTQREY
181 GDTPRYFLLD EQGPDNNKCF KVAAQVHDER FPAAWGSTKK EAELKAAMNA LAHIHGEPLP
241 FPPA
//