LOCUS VTR97227.1 239 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna-binding response regulator : DNA-
binding response regulator OS=Chondromyces apiculatus
DSM 436 GN=CAP_5016 PE=4 SV=1: Response_reg: HTH_19 protein.
ACCESSION LR593886-6189
PROTEIN_ID VTR97227.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_08260"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A017T523|A0A017T523_9DELT ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Chondromyces apiculatus DSM 436
GN=CAP_5016 PE=4 SV=1 ; EVALUE=5e-42 ;
Q/S_length_ratio=1.183"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A9GVM7|A9GVM7_SORC5 ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum (strain So ce56)
GN=sce0622 PE=4 SV=1 ; EVALUE=1e-41 ;
Q/S_length_ratio=1.183"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|S4XJY8|S4XJY8_SORCE ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Chemotaxis protein
CheY OS=Sorangium cellulosum So0157-2 GN=SCE1572_04235
PE=4 SV=1 ; EVALUE=1e-41 ; Q/S_length_ratio=1.183"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|H8ML50|H8ML50_CORCM ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Corallococcus coralloides (strain
ATCC 25202 / DSM 2259 / NBRC 100086 / M2) GN=digR PE=4
SV=1 ; EVALUE=3e-38 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F8CKN3|F8CKN3_MYXFH ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Myxococcus fulvus (strain ATCC
BAA-855 / HW-1) GN=LILAB_35425 PE=4 SV=1 ; EVALUE=4e-38 ;
Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1A7N5|Q1A7N5_MYXXA ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DigR OS=Myxococcus
xanthus GN=digR PE=4 SV=1 ; EVALUE=4e-38 ;
Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|U2S4P3|U2S4P3_9DELT ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Myxococcus sp. (contaminant ex DSM
436) GN=A176_05126 PE=4 SV=1 ; EVALUE=4e-38 ;
Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7UHW7|L7UHW7_MYXSD ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Myxococcus stipitatus (strain DSM
14675 / JCM 12634 / Mx s8) GN=MYSTI_06182 PE=4 SV=1 ;
EVALUE=4e-38 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q1D0U2|Q1D0U2_MYXXD ;
ALN/Q_length_ratio=0.891 ; DESCRIPTION=DNA-binding
response regulator OS=Myxococcus xanthus (strain DK 1622)
GN=MXAN_5592 PE=4 SV=1 ; EVALUE=9e-38 ;
Q/S_length_ratio=1.077"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085VZU0|A0A085VZU0_9DELT ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Hyalangium minutum GN=DB31_4577 PE=4
SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A085X3B6|A0A085X3B6_9DELT ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Enhygromyxa salina GN=DB30_7101 PE=4
SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q09BN5|Q09BN5_STIAD ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DigR protein
OS=Stigmatella aurantiaca (strain DW4/3-1) GN=digR PE=4
SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D0LWJ6|D0LWJ6_HALO1 ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Transcriptional
regulator, XRE family OS=Haliangium ochraceum (strain DSM
14365 / JCM 11303 / SMP-2) GN=Hoch_5158 PE=4 SV=1 ;
EVALUE=8e-37 ; Q/S_length_ratio=1.207"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A084SX81|A0A084SX81_9DELT ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Chemotaxis protein
CheY OS=Cystobacter violaceus Cb vi76 GN=Q664_11285 PE=4
SV=1 ; EVALUE=7e-36 ; Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|S9PF07|S9PF07_9DELT ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=DNA-binding
response regulator OS=Cystobacter fuscus DSM 2262
GN=D187_006385 PE=4 SV=1 ; EVALUE=6e-35 ;
Q/S_length_ratio=1.213"
/note="Pfam_scan:hit_1 (43..154);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:2.1e-19; BITSCORE: 69.5"
/note="Pfam_scan:hit_2 (175..237); Pfam:PF12844.2:HTH_19;
Pfam_type:Domain;HMM_aln_Length:60; HMM_Length:64;
EVALUE:4.9e-13; BITSCORE: 48.9"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
BEGIN
1 MPYDIEDRLT QTPKPLYPIM TPPPKPQAMP ASRELQSSGD IHILILDDDP HTCAVIQAAL
61 NNRDFVTEVV SDPMMVESAL SSGRRYHLIV LDYVLPGLEA EQVFGWIRDH QPDANIVVVT
121 GYPSVDSAIN CLRAKTCDYL TKPFQIEQLR EIVYRCLESQ GLLRMTEDAL KEALGAAIRE
181 RRKALALTLS NMSDRTGVSL GYLSQIELGK NSASIETLYR ICLALGMKMS ELFLSVQRA
//