LOCUS VTR97185.1 249 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pseudouridine synthase : Pseudouridine
synthase OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1548 PE=
3 SV=1: PseudoU_synth_2 protein.
ACCESSION LR593886-6168
PROTEIN_ID VTR97185.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_08470"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D9M3|L0D9M3_SINAD ;
ALN/Q_length_ratio=0.884 ; DESCRIPTION=Pseudouridine
synthase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1548
PE=3 SV=1 ; EVALUE=2e-66 ; Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SQT2|D5SQT2_PLAL2 ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Pseudouridine
synthase OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2721 PE=3 SV=1 ;
EVALUE=3e-61 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|R7H3I1|R7H3I1_9BACT ;
ALN/Q_length_ratio=0.876 ; DESCRIPTION=Pseudouridine
synthase OS=Prevotella stercorea CAG:629 GN=BN741_01656
PE=3 SV=1 ; EVALUE=1e-57 ; Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F0S4V3|F0S4V3_PEDSD ;
ALN/Q_length_ratio=0.867 ; DESCRIPTION=Pseudouridine
synthase OS=Pedobacter saltans (strain ATCC 51119 / DSM
12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643)
GN=Pedsa_3598 PE=3 SV=1 ; EVALUE=2e-57 ;
Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I2ESV8|I2ESV8_EMTOG ;
ALN/Q_length_ratio=0.871 ; DESCRIPTION=Pseudouridine
synthase OS=Emticicia oligotrophica (strain DSM 17448 /
GPTSA100-15) GN=Emtol_1616 PE=3 SV=1 ; EVALUE=5e-57 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|G6B077|G6B077_9BACT ;
ALN/Q_length_ratio=0.876 ; DESCRIPTION=Pseudouridine
synthase OS=Prevotella stercorea DSM 18206
GN=HMPREF0673_02294 PE=3 SV=1 ; EVALUE=7e-57 ;
Q/S_length_ratio=1.112"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G9X302|G9X302_9FIRM ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Pseudouridine
synthase OS=Peptostreptococcaceae bacterium ACC19a
GN=HMPREF9629_00759 PE=3 SV=1 ; EVALUE=1e-56 ;
Q/S_length_ratio=1.127"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|I2GQA0|I2GQA0_9BACT ;
ALN/Q_length_ratio=0.863 ; DESCRIPTION=Pseudouridine
synthase OS=Fibrisoma limi BUZ 3 GN=BN8_05387 PE=3 SV=1 ;
EVALUE=1e-56 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E4RX09|E4RX09_LEAB4 ;
ALN/Q_length_ratio=0.863 ; DESCRIPTION=Pseudouridine
synthase OS=Leadbetterella byssophila (strain DSM 17132 /
KACC 11308 / 4M15) GN=Lbys_2372 PE=3 SV=1 ; EVALUE=9e-56 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K1LHA5|K1LHA5_9LACT ;
ALN/Q_length_ratio=0.851 ; DESCRIPTION=RluA family
pseudouridine synthase OS=Facklamia ignava CCUG 37419
GN=HMPREF9707_01312 PE=4 SV=1 ; EVALUE=1e-55 ;
Q/S_length_ratio=1.092"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|U6Q118|U6Q118_9FIRM ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Pseudouridine
synthase OS=Peptostreptococcaceae bacterium CM2
GN=HMPREF9630_02143 PE=3 SV=1 ; EVALUE=1e-55 ;
Q/S_length_ratio=1.127"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|J4W161|J4W161_9FIRM ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Pseudouridine
synthase OS=Peptostreptococcaceae bacterium OBRC8
GN=HMPREF1143_1576 PE=3 SV=1 ; EVALUE=4e-55 ;
Q/S_length_ratio=1.127"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C2FZ49|C2FZ49_9SPHI ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=Pseudouridine
synthase OS=Sphingobacterium spiritivorum ATCC 33300
GN=HMPREF0765_2605 PE=3 SV=1 ; EVALUE=7e-55 ;
Q/S_length_ratio=1.083"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B9YE32|B9YE32_9FIRM ;
ALN/Q_length_ratio=0.839 ; DESCRIPTION=RNA pseudouridine
synthase OS=Holdemania filiformis DSM 12042
GN=HOLDEFILI_04106 PE=4 SV=1 ; EVALUE=8e-55 ;
Q/S_length_ratio=1.107"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D7VTS4|D7VTS4_9SPHI ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=Pseudouridine
synthase OS=Sphingobacterium spiritivorum ATCC 33861
GN=rluC PE=3 SV=1 ; EVALUE=1e-54 ; Q/S_length_ratio=1.092"
/note="Pfam_scan:hit_1 (19..186);
Pfam:PF00849.17:PseudoU_synth_2;
Pfam_type:Family;HMM_aln_Length:162; HMM_Length:164;
EVALUE:8.7e-30; BITSCORE: 103.7"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:5.4.99.12"
BEGIN
1 MMSRMSFAEH LDILYEDNHC LALNKPAGWP TTHFDGKDET IDRLVKAYLK EKYDKPGNVF
61 LGVVHRLDKP VSGALLFART SKSAARLSEQ FREGGVEKCY WAVVENQVRG KTATAAPWAT
121 ADNGAIEDWL KKDEPKMRVE VVAPETPGAQ FARLLFQVRA RHNGLTWLEL RPHTGRKHQL
181 RVQLASRGTP IYGDDKYGSD QSFGHAIGLH ARSLTFLHPT TKEPITAKAD VPKFWRGRFA
241 YLLNGDRPI
//