LOCUS VTR97143.1 428 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rnd family efflux transporter mfp subunit
: RND family efflux transporter, MFP subunit OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_3860 PE=4 SV=1: HlyD protein.
ACCESSION LR593886-6147
PROTEIN_ID VTR97143.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_08680"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DGV8|L0DGV8_SINAD ;
ALN/Q_length_ratio=0.794 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_3860 PE=4 SV=1 ; EVALUE=3e-71 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DLK6|L0DLK6_SINAD ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6016 PE=4 SV=1 ; EVALUE=2e-69 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5UPD0|M5UPD0_9PLAN ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Efflux transporter
RND family, MFP subunit OS=Rhodopirellula sallentina SM41
GN=RSSM_00677 PE=4 SV=1 ; EVALUE=2e-69 ;
Q/S_length_ratio=0.962"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|J6UJ99|J6UJ99_9RHOB ;
ALN/Q_length_ratio=0.801 ; DESCRIPTION=Putative Co/Zn/Cd
efflux system membrane fusion protein OS=Rhodovulum sp.
PH10 GN=A33M_2504 PE=4 SV=1 ; EVALUE=9e-66 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2R328|D2R328_PIRSD ;
ALN/Q_length_ratio=1.009 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_4111 PE=4 SV=1 ;
EVALUE=3e-63 ; Q/S_length_ratio=0.794"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|U5U6I6|U5U6I6_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Acriflavin
resistance protein AcrA OS=Klebsiella pneumoniae
GN=MC75_03320 PE=4 SV=1 ; EVALUE=1e-62 ;
Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1PZQ8|Q1PZQ8_9BACT ;
ALN/Q_length_ratio=0.829 ; DESCRIPTION=Strongly similar to
RND multidrug efflux membrane fusion protein MexE
OS=Candidatus Kuenenia stuttgartiensis GN=MexE PE=4 SV=1 ;
EVALUE=3e-60 ; Q/S_length_ratio=1.070"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K1MFJ2|K1MFJ2_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Klebsiella pneumoniae subsp.
pneumoniae WGLW1 GN=HMPREF1305_01253 PE=4 SV=1 ;
EVALUE=3e-59 ; Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K1PFA5|K1PFA5_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Klebsiella pneumoniae subsp.
pneumoniae WGLW3 GN=HMPREF1307_01426 PE=4 SV=1 ;
EVALUE=3e-59 ; Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|V3BF90|V3BF90_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Uncharacterized
protein OS=Klebsiella pneumoniae BIDMC 24 GN=L460_03010
PE=4 SV=1 ; EVALUE=5e-59 ; Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5Q601|M5Q601_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=RND efflux system,
membrane fusion protein CmeA OS=Klebsiella pneumoniae
RYC492 GN=KPRYC492_06015 PE=4 SV=1 ; EVALUE=1e-58 ;
Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|G1CSU7|G1CSU7_ECOLX ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=RND multidrug
efflux membrane fusion protein OqxA2 OS=Escherichia coli
GN=oqxA2 PE=4 SV=1 ; EVALUE=1e-58 ;
Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|U5U790|U5U790_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=OqxA OS=Klebsiella
pneumoniae GN=oqxA PE=4 SV=1 ; EVALUE=1e-58 ;
Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A066EKV5|A0A066EKV5_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Uncharacterized
protein OS=Klebsiella pneumoniae MGH 64 GN=AF50_02997 PE=4
SV=1 ; EVALUE=1e-58 ; Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|V3M719|V3M719_KLEPN ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Uncharacterized
protein OS=Klebsiella pneumoniae MGH 36 GN=L382_03070 PE=4
SV=1 ; EVALUE=1e-58 ; Q/S_length_ratio=1.095"
/note="Pfam_scan:hit_1 (67..359); Pfam:PF00529.15:HlyD;
Pfam_type:Family;HMM_aln_Length:235; HMM_Length:305;
EVALUE:1.6e-30; BITSCORE: 106.5"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MTKWNRRLLR PTVLSGLAAA LFALIGCKPD AEKKADLPHP IVSTAHPIER TVTRYEMATG
61 RAAPLEQVEI RARVNGYLKA IHFQPGREVE KGQLLFEIDS EPYKADLARA KAALETAVAD
121 LATSEADQQK ADSRVTTTKA EHERQEALFK QGVGEQQTRN IAKGSYDEAS AAFRSAQAKV
181 KLSKAKIDEA RATVQSAELN LGYCTISSPI TGIVGDKLVT EGNLITGGVG NTTLLTTVVA
241 VEKMDVAFDV DENTLQRIQQ AVRDGKVKST DLGEIPAEAG LALHGTAYPL KGKINFADNQ
301 FNPKTGTVRM KARFDNPKPP VGQRLLAAGM YARVRVPIGA PVKAMLVPES AFGSDQGVKF
361 LYLVGPENKA VRMNATLGVQ EGEERVVESI DIPGEGKPRP LTTGDQVIVS GLQRLRPGMT
421 VEPKPAKK
//