LOCUS VTR97053.1 465 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana two sigma54 transcriptional fis family
: Response regulator with CheY-like receiver, AAA-type
ATPase, and DNA-binding domains OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_2376 PE=4 SV=1: Response_reg: Sigma54_activat:
HTH_8 protein.
ACCESSION LR593886-6102
PROTEIN_ID VTR97053.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_09130"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DCX3|L0DCX3_SINAD ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2376 PE=4 SV=1
; EVALUE=1e-158 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|C9RAR8|C9RAR8_AMMDK ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Ammonifex degensii (strain DSM 10501 / KC4)
GN=Adeg_0173 PE=4 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|I0GJJ1|I0GJJ1_CALEA ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=NtrC family
two-component system response regulator OS=Caldisericum
exile (strain DSM 21853 / NBRC 104410 / AZM16c01)
GN=CSE_08020 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D1CFK1|D1CFK1_THET1 ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1)
GN=Tter_0790 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I4ECM0|I4ECM0_9CHLR ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein atoC OS=Nitrolancea
hollandica Lb GN=atoC PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F8EZ61|F8EZ61_TRECH ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Treponema caldaria (strain ATCC 51460 / DSM 7334 / H1)
GN=Spica_1509 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E0RQK9|E0RQK9_SPITD ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Transcriptional
regulatory protein OS=Spirochaeta thermophila (strain ATCC
49972 / DSM 6192 / RI 19.B1) GN=STHERM_c05440 PE=4 SV=1 ;
EVALUE=1e-134 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|G0G9U6|G0G9U6_SPITZ ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578
/ Z-1203) GN=Spith_0566 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F2NE61|F2NE61_DESAR ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfobacca acetoxidans (strain ATCC 700848 / DSM
11109 / ASRB2) GN=Desac_2891 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D1C2T4|D1C2T4_SPHTD ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Sphaerobacter thermophilus (strain DSM 20745 / S 6022)
GN=Sthe_1115 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A5CZX6|A5CZX6_PELTS ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Response regulator
OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM
10971 / SI) GN=AtoC PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|U2S9D9|U2S9D9_9DELT ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Response regulatory
protein OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_00329 PE=4 SV=1 ; EVALUE=1e-131 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B8J7A6|B8J7A6_ANAD2 ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC
BAA-258) GN=A2cp1_1954 PE=4 SV=1 ; EVALUE=1e-131 ;
Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A099S8P0|A0A099S8P0_9FIRM ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Transcriptional
regulator OS=Desulfosporosinus sp. HMP52 GN=DP73_11210
PE=4 SV=1 ; EVALUE=1e-131 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A078LEA9|A0A078LEA9_CITKO ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein AtoC OS=Citrobacter koseri
GN=BN1086_00561 PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=1.009"
/note="Pfam_scan:hit_1 (11..121);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:1.3e-22; BITSCORE: 79.9"
/note="Pfam_scan:hit_2 (152..319);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:1.7e-69; BITSCORE: 232.5"
/note="Pfam_scan:hit_3 (420..461); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42;
EVALUE:7.5e-15; BITSCORE: 54.2"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MTASPAHAPV ILVAEDAPAT RSNLTLLLRS EGYTVREAAD GDAAAEALGD PGVAAALLDL
61 KMPGRDGLAV LRAHADRLEE VPVVVVTAYG GSSAAIEAMR LGAYDYLTKP FDLDEVLLTV
121 RRALTQRALV AQVQALSADP LADDPDPERD ELVGRSPAMV AVFKAIGLVA PADEPVLILG
181 ESGTGKELVA NAIHRNSPRA ARPLVKVNCA ALSPTLLESE LFGHEKGAFT GAVARRRGRF
241 EQAHGGTLFL DEVGELGLEL QAKLLRVLQS GTFERVGGEE TLTADARVVA ATNRDLKARV
301 AAGEFREDLY YRLDVVAVTL PPLRSRKDDV PLLAEYVVKQ LARKHGWPGL ALSPEAVVAL
361 GRREWPGNVR ELRNALARAA ILARGRVVRA EHLAGDDPAT VPVPPVVVPP GAGALDLRAA
421 VAEAERRVIR QALEQAGGNR TRAAELLGIS RRQLFDKVRA YGLDR
//