LOCUS VTR97043.1 769 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1:
HAMP: PAS_9: MCPsignal protein.
ACCESSION LR593886-6097
PROTEIN_ID VTR97043.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_09180"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.632 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.584 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-149 ; Q/S_length_ratio=1.286"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.588 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-146 ;
Q/S_length_ratio=1.479"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.610 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-139 ; Q/S_length_ratio=0.845"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G0A6T8|G0A6T8_METMM ;
ALN/Q_length_ratio=0.589 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylomonas methanica (strain MC09) GN=Metme_2154 PE=4
SV=1 ; EVALUE=1e-139 ; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A085PEP8|A0A085PEP8_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DA89_2479 PE=4 SV=1 ; EVALUE=1e-138
; Q/S_length_ratio=1.429"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D7HGU4|D7HGU4_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae RC385
GN=VCRC385_00092 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=1.328"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|C2IXB5|C2IXB5_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae TMA 21 GN=VCB_003522
PE=4 SV=1 ; EVALUE=1e-138 ; Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A0A0BI86|A0A0A0BI86_9GAMM ;
ALN/Q_length_ratio=0.609 ; DESCRIPTION=Methyl-accepting
chemotaxis protein I (Serine chemoreceptor protein)
OS=Methylophaga thiooxydans GN=LP43_0636 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A085PQ25|A0A085PQ25_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DN41_2401 PE=4 SV=1 ; EVALUE=1e-138
; Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C2C588|C2C588_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae 12129(1)
GN=VCG_000220 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K2VD55|K2VD55_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae CP1037(10) GN=VCCP103710_0119 PE=4 SV=1
; EVALUE=1e-137 ; Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A6A5F2|A6A5F2_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae MZO-2 GN=A5A_0096
PE=4 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2IQ61|F2IQ61_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae LMA3984-4 GN=cheD
PE=4 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A2P7V9|A2P7V9_VIBCL ;
ALN/Q_length_ratio=0.654 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae 1587 GN=A55_0116
PE=4 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=1.167"
/note="Pfam_scan:hit_1 (6..188); Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:178; HMM_Length:181;
EVALUE:5.4e-26; BITSCORE: 91.0"
/note="Pfam_scan:hit_2 (195..264); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:66; HMM_Length:70;
EVALUE:8e-12; BITSCORE: 45.1"
/note="Pfam_scan:hit_3 (296..400); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:100; HMM_Length:104;
EVALUE:1.8e-14; BITSCORE: 53.9"
/note="Pfam_scan:hit_4 (516..715);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:206; HMM_Length:213;
EVALUE:1.4e-64; BITSCORE: 217.5"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MTKFNDLGIG TRLIGGFLVL AIACAVVGFW GIRSMTQINE SLENANANLI PSLRAVTDLR
61 SGLSTVQRTE RSILMATSNK DEGTRSQAAG SQEAAWVKAR ESQKRYEALP MSDKEKKVWA
121 EFLPRLEEFR RDHEATMAAL KAGEPEKAEK MCVASGPNAT KVSALLNELC DFQGESAERD
181 AKEAQELFAS SKTTMYAVIG GAVLVAVGLG VFFRNLIVNP LTATVRVLQA VASGDLTQKA
241 AVTSADEFGQ MGTALNATVQ GIHTALQQDK VNWEVVGKQR AENADYVGQI AAIKRSQAVI
301 EFRLDGTVVD ANENFLRTAG YSLPEIQGRH HSTFVGPSFA SSSEYRDFWT RLNRGESVSG
361 EFERIGKGGA GLWFQASYNP ILDLNGKPYK VVKYATDITA AKNMEQKVKE DAVELKHKVA
421 TIMTSVSALA AGDFTQEAPD LGDDQVGQMG AALNKAVVSV RTALEGVREV SEQLADASGQ
481 LSAASDEIST GAQEQASSLE ETASTLEEIT ATVRQNSDSA QQARQLASSS KDIAEKGGRV
541 VGNAVEAMSE INQSSKKIAD IITTIDEIAF QTNLLALNAA VEAARAGEQG RGFAVVASEV
601 RNLAQRSATA AKEIKSLIED SVKKVEAGTE LVNQSGSTLG EIVTSVKRVT DLITEIAAAG
661 KEQSTGIEQV NKAVTQMDSV TQKNASQTEE MSATAQTLTD QASQLRDLVA RFKLSESGRV
721 APRHTARTKP SVTKPRPAVA KALKTGATNG NGRKHELDQL GGDGGFTEF
//