LOCUS VTR96917.1 894 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: HAMP:
PAS_9: MCPsignal protein.
ACCESSION LR593886-6034
PROTEIN_ID VTR96917.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_09810"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.559 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-151 ; Q/S_length_ratio=1.158"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.516 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-148 ; Q/S_length_ratio=1.495"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G0A6T8|G0A6T8_METMM ;
ALN/Q_length_ratio=0.517 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylomonas methanica (strain MC09) GN=Metme_2154 PE=4
SV=1 ; EVALUE=1e-147 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.508 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=1.719"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.526 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-143 ; Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Y0KHL8|Y0KHL8_9PROT ;
ALN/Q_length_ratio=0.536 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylophilaceae bacterium 11 GN=Meth11DRAFT_1510 PE=4
SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F5SZW9|F5SZW9_9GAMM ;
ALN/Q_length_ratio=0.499 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Methylophaga
aminisulfidivorans MP GN=MAMP_01685 PE=3 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=0.970"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A5EDT7|A5EDT7_BRASB ;
ALN/Q_length_ratio=0.539 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=BBta_2145 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K5KY81|K5KY81_VIBCL ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-1A2 GN=VCHC1A2_0123 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.412"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K5T0I3|K5T0I3_VIBCL ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Aerotaxis
transducer Aer2 domain protein OS=Vibrio cholerae HC-55B2
GN=aer2 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.412"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5MIT2|K5MIT2_VIBCL ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-60A1 GN=VCHC60A1_0116 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.412"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085PEP8|A0A085PEP8_VIBCL ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DA89_2479 PE=4 SV=1 ; EVALUE=1e-137
; Q/S_length_ratio=1.662"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D7HGU4|D7HGU4_VIBCL ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae RC385
GN=VCRC385_00092 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.544"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K2VMY6|K2VMY6_VIBCL ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Aerotaxis
transducer Aer2 domain protein OS=Vibrio cholerae HC-55A1
GN=aer2 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.412"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K5N429|K5N429_VIBCL ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-61A2 GN=VCHC61A2_0041 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.412"
/note="Pfam_scan:hit_1 (315..384); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:70;
EVALUE:2.4e-13; BITSCORE: 50.0"
/note="Pfam_scan:hit_2 (416..520); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:100; HMM_Length:104;
EVALUE:1.2e-14; BITSCORE: 54.4"
/note="Pfam_scan:hit_3 (634..835);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:1.5e-63; BITSCORE: 214.1"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MSLSKRLRDL SLKWKLTAAL VLLGLFPMAA VIYVADANAR ADLESRSGRL LELRASGTID
61 KIERNFFERY GDVQVFAFNP MALGAPGEVT AAANYYTKTY GLYDLMVVAD VNGKVIAANT
121 VTGEGKPLDT SALVGRDVKN EEWFQACING RVPDGESYAQ DVREDKWVAE VYRNRGMAVS
181 FSAPVRDKAG KVVRVWSNRA SWARVVEPIM QEVRESNKGM ETQLISKTGV LLDDYDPKAV
241 LSLNLREIGL KAAVLGTEGK TGFIIEEHKR RKVPQINAYS ASAGYSTYKG FGWSVLVRQD
301 ESEVLTAAVA TRLQLLAMAG AGTAILFGVA LWLGATIARP IRKIMVSLGE VAQGDLTPHA
361 DVNGRDEVGQ MAEAFNATVR GIRTALQQEK VSWEAVGKQR EQNADFAGQI AAVSKAQAII
421 EFKMDGTIAN ANENFLRTMG YSLPEIQGRH HSMFAEPAFA ASPEYREFWA KLNRGEYVAN
481 EFKRVGKGGK EIWIQASYNP ILDLNGKPYK VVKYATDITA AKHMEQKVKE DAVELHQKVT
541 AITASVSALA AGDFTQHAPD LGTDVVGQMA TALNKAVVSV RTALEGVREV SVQLADASGQ
601 LSSASEEIST GAQEQASSLE ETASALEEIT ATVKQNSDSA QQARQLAGSS KEIAEKGGQV
661 VGSAVGAMSQ INESSKKIAD IITTIDEIAF QTNLLALNAA VEAARAGEQG RGFAVVASEV
721 RNLAQRSATA AKEIKGLIED SVKKVDAGTE LVNRSGSTLG EIVTSVTRVT SIITEIAGAS
781 KEQSVGIDQV NKAVSQMDTV TQRNASQTEE LSATAQTLTE QAAHLRDLVS RFKLSDDGHG
841 ASRPAPKPAR AKVAAPKPRP AVARAMKSGH SNGNGHAHEL DRLGSDAHDG FTEF
//