LOCUS VTR96873.1 425 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana l-sorbosone dehydrogenase : L-sorbosone
dehydrogenase OS=Cystobacter fuscus DSM 2262 GN=D187_007931
PE=4 SV=1: GSDH protein.
ACCESSION LR593886-6012
PROTEIN_ID VTR96873.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_10030"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6EC14|A6EC14_9SPHI ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Pedobacter sp. BAL39 GN=PBAL39_17639 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A076HV62|A0A076HV62_9BACT ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=Uncharacterized
protein OS=Hymenobacter sp. APR13 GN=N008_11035 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=0.940"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|H8MSV6|H8MSV6_CORCM ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Corallococcus coralloides (strain ATCC
25202 / DSM 2259 / NBRC 100086 / M2) GN=yliI PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W9HBT1|W9HBT1_9PROT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Sorbosone
dehydrogenase OS=Skermanella stibiiresistens SB22
GN=N825_19950 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A081PBG5|A0A081PBG5_9SPHI ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Sphingobacterium antarcticus 4BY
GN=N180_19335 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q11TQ4|Q11TQ4_CYTH3 ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Cytophaga hutchinsonii (strain ATCC 33406
/ NCIMB 9469) GN=yliI PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D2QJ52|D2QJ52_SPILD ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=NHL
repeat-containing protein OS=Spirosoma linguale (strain
ATCC 33905 / DSM 74 / LMG 10896) GN=Slin_1015 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.970"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|R9GLW6|R9GLW6_9SPHI ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Arcticibacter svalbardensis MN12-7
GN=ADIARSV_3915 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F8CD28|F8CD28_MYXFH ;
ALN/Q_length_ratio=0.915 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Myxococcus fulvus (strain ATCC BAA-855 /
HW-1) GN=LILAB_14195 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W8F1I2|W8F1I2_9BACT ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Hymenobacter swuensis DY53 GN=Hsw_3669
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|U2U6G3|U2U6G3_9DELT ;
ALN/Q_length_ratio=0.915 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_06026 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C6W4H0|C6W4H0_DYAFD ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=Glucose/sorbosone
dehydrogenase-like protein OS=Dyadobacter fermentans
(strain ATCC 700827 / DSM 18053 / NS114) GN=Dfer_2856 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|I2GT37|I2GT37_9BACT ;
ALN/Q_length_ratio=1.009 ; DESCRIPTION=NHL
repeat-containing protein OS=Fibrisoma limi BUZ 3
GN=BN8_06467 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|S9Q5J7|S9Q5J7_9DELT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Cystobacter fuscus DSM 2262
GN=D187_007931 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E3FXD9|E3FXD9_STIAD ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=L-sorbosone
dehydrogenase OS=Stigmatella aurantiaca (strain DW4/3-1)
GN=yliI PE=4 SV=1 ; EVALUE=1e-179 ;
Q/S_length_ratio=0.973"
/note="Pfam_scan:hit_1 (155..419); Pfam:PF07995.6:GSDH;
Pfam_type:Domain;HMM_aln_Length:223; HMM_Length:331;
EVALUE:1e-24; BITSCORE: 87.2"
/note="GO_domain:GO:0005975"
/note="GO_domain:GO:0016491"
BEGIN
1 MRTLLLSLGA LTFSTAPALA ADPPAPPTLP PPFDTKSVVK HPKVIGWPAG KTPAAPAGFA
61 VVLFAEKFDS PRWLYVLPNG DVLVAEARTL PKKDAKPEVK EGLKQSKTVT GGSANRITLL
121 RDADKDGTPE VRETFLSDLN QPFGMALIGD QLFVANTDGV LRFPYKTGDT KITAKGTPIL
181 HLPIGGYNNH WTRNIVASAD GSKLYVTVGS ASNVGENGMK EEALRANILE VNPDGTGLRV
241 FAAGLRNPVG TAWEPTTKTL WTAVNERDEL GDELVPDYIT SVKDGGFYGW PYSYFGKNED
301 PRRKGERPDL VAKATAPDLA IGSHTASLGL CFYTGSAFPE KYRGGAFIGQ RGSWNRSKFA
361 GYRVAFVPFK DGKPASGPED FLTGFIANDD EVYGRPVCVC VAPDGALLVT DDVTDRIWRV
421 APVKK
//