LOCUS VTR96685.1 814 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana regulatory subunit : Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1: Sigma70_r2:
Sigma70_r4_2: LRR_6: LRR_6: LRR_6: LRR_6: LRR_6: LRR_6
protein.
ACCESSION LR593886-5918
PROTEIN_ID VTR96685.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_10970"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q5EUH2|Q5EUH2_9PLAN ;
ALN/Q_length_ratio=0.509 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=5e-72 ; Q/S_length_ratio=1.480"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6C325|A6C325_9PLAN ;
ALN/Q_length_ratio=0.501 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09949
PE=4 SV=1 ; EVALUE=5e-56 ; Q/S_length_ratio=1.507"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A090KN24|A0A090KN24_9BACT ;
ALN/Q_length_ratio=0.537 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-55 ;
Q/S_length_ratio=1.612"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q6MCE3|Q6MCE3_PARUW ;
ALN/Q_length_ratio=0.522 ; DESCRIPTION=Putative
uncharacterized protein OS=Protochlamydia amoebophila
(strain UWE25) GN=pc1032 PE=4 SV=1 ; EVALUE=7e-53 ;
Q/S_length_ratio=1.109"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q5EUG5|Q5EUG5_9PLAN ;
ALN/Q_length_ratio=0.348 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=5e-49 ; Q/S_length_ratio=2.025"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q6MBX8|Q6MBX8_PARUW ;
ALN/Q_length_ratio=0.516 ; DESCRIPTION=Putative
uncharacterized protein OS=Protochlamydia amoebophila
(strain UWE25) GN=pc1197 PE=4 SV=1 ; EVALUE=9e-49 ;
Q/S_length_ratio=1.222"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D8S9I0|D8S9I0_SELML ;
ALN/Q_length_ratio=0.537 ; DESCRIPTION=Putative
uncharacterized protein OS=Selaginella moellendorffii
GN=SELMODRAFT_162512 PE=4 SV=1 ; EVALUE=4e-48 ;
Q/S_length_ratio=1.408"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2V3L5|D2V3L5_NAEGR ;
ALN/Q_length_ratio=0.512 ; DESCRIPTION=Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_63408 PE=4 SV=1 ;
EVALUE=2e-47 ; Q/S_length_ratio=1.817"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q6M9U9|Q6M9U9_PARUW ;
ALN/Q_length_ratio=0.581 ; DESCRIPTION=Putative
uncharacterized protein OS=Protochlamydia amoebophila
(strain UWE25) GN=pc1926 PE=4 SV=1 ; EVALUE=9e-47 ;
Q/S_length_ratio=1.070"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K7ML06|K7ML06_SOYBN ;
ALN/Q_length_ratio=0.568 ; DESCRIPTION=Uncharacterized
protein OS=Glycine max PE=4 SV=1 ; EVALUE=2e-46 ;
Q/S_length_ratio=1.401"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|V7AT43|V7AT43_PHAVU ;
ALN/Q_length_ratio=0.526 ; DESCRIPTION=Uncharacterized
protein OS=Phaseolus vulgaris GN=PHAVU_010G157600g PE=4
SV=1 ; EVALUE=2e-46 ; Q/S_length_ratio=1.411"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M1D0U4|M1D0U4_SOLTU ;
ALN/Q_length_ratio=0.579 ; DESCRIPTION=Uncharacterized
protein OS=Solanum tuberosum GN=PGSC0003DMG400030688 PE=4
SV=1 ; EVALUE=6e-46 ; Q/S_length_ratio=1.408"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A6C3D3|A6C3D3_9PLAN ;
ALN/Q_length_ratio=0.462 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_26210
PE=4 SV=1 ; EVALUE=8e-46 ; Q/S_length_ratio=1.770"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M1D0U2|M1D0U2_SOLTU ;
ALN/Q_length_ratio=0.579 ; DESCRIPTION=Uncharacterized
protein OS=Solanum tuberosum GN=PGSC0003DMG400030688 PE=4
SV=1 ; EVALUE=9e-46 ; Q/S_length_ratio=1.428"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D2V3M3|D2V3M3_NAEGR ;
ALN/Q_length_ratio=0.479 ; DESCRIPTION=Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_63416 PE=4 SV=1 ;
EVALUE=2e-45 ; Q/S_length_ratio=1.911"
/note="Pfam_scan:hit_1 (43..112);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:62; HMM_Length:71;
EVALUE:3.6e-06; BITSCORE: 26.4"
/note="Pfam_scan:hit_2 (138..191);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:52; HMM_Length:54;
EVALUE:4.5e-14; BITSCORE: 51.6"
/note="Pfam_scan:hit_3 (518..540); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:20; HMM_Length:24;
EVALUE:0.17; BITSCORE: 12.0"
/note="Pfam_scan:hit_4 (566..589); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:20; HMM_Length:24;
EVALUE:1.2; BITSCORE: 9.4"
/note="Pfam_scan:hit_5 (590..612); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:0.0019; BITSCORE: 18.0"
/note="Pfam_scan:hit_6 (640..662); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:18; HMM_Length:24;
EVALUE:0.52; BITSCORE: 10.5"
/note="Pfam_scan:hit_7 (734..757); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.0035; BITSCORE: 17.2"
/note="Pfam_scan:hit_8 (758..781); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.25; BITSCORE: 11.5"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSARLRRWLR TPGAGTAPEA TAPDGELVCR FVEARDEAAF TELVRRHGPM VLAACRRVLD
61 PDVHTADDAF QATFLVLASR AAKISPPERV GAWLHGVAVR VAQKARTWAR KIAPAVPGDL
121 AAIPHVVREA NPDADELRAQ IDDALAGLPS KYRVAVVLCE LEGRSRKEAA TALGWSEGTL
181 SSRLARARKL LADRLARRGV TVPAVGLGAA ATVPVHLAAQ TTRTAALVAT GAHTGNVIPA
241 RVVALARGVS VRPAGFKLVA AVLTLAAVAL GGAGLYALTV APPGPKGGPA RDNREPGQPV
301 VGAPPKGEAA NGPLKEGAPE RPGFDQATID AWEKRGFEAG WIEVHRYGWN TYLRNTPARP
361 GPSAVPAFIY SDSKPKLTDE GLKNLPPIDV PFALGLRGTR VAITDAGLEH LAGLKNLTHL
421 SLLGTRVRGT GLKHLTGLKN LTAIELTQAP VTDAGLKHLA DLKGLTRITL CYANNYYAHE
481 DLDGAWLKHL AGLKKLTHLD LYSSRVTDEW LEHLVAPEAL THLDLGRASV TDEGLRHLAK
541 VKNLTSLDLT LNEEVTDKGL VELGGLEHLA DLNLSQTRVT GDGMKHLAGL KNLTSLNLSM
601 TRVTDEGLGH LTGLKNLIDL NLYSVPGVTN EGLKYLAGFD KLTTLDLCAA KITDEGLKDV
661 AGLKNLTTLK LCGPLTEAGL KHVAGLKNLT TLKLWCPEMS DDGLKHIVGL TKLTHLDLHI
721 TPVSDAGLAH LTGLTNLTHL DLGLTKVTDE GLVHLAGFNK LRTLNLSSTE ITGSGWKHLA
781 KLQGLTRLDL SSTKISAPPV TLLRSALPDC EIVR
//