LOCUS VTR96641.1 310 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcription termination antitermination
factor : Transcription termination/antitermination protein
NusG OS=Planctomyces maris DSM 8797 GN=nusG PE=3 SV=1:
NusG protein.
ACCESSION LR593886-5896
PROTEIN_ID VTR96641.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_11190"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A6CA55|A6CA55_9PLAN ;
ALN/Q_length_ratio=0.623 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Planctomyces
maris DSM 8797 GN=nusG PE=3 SV=1 ; EVALUE=7e-39 ;
Q/S_length_ratio=1.598"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SII7|F0SII7_PLABD ;
ALN/Q_length_ratio=0.610 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=nusG PE=3 SV=1 ; EVALUE=2e-38
; Q/S_length_ratio=1.558"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D8J2|L0D8J2_SINAD ;
ALN/Q_length_ratio=0.594 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=nusG PE=3 SV=1 ; EVALUE=4e-38 ;
Q/S_length_ratio=1.183"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R5P4|D2R5P4_PIRSD ;
ALN/Q_length_ratio=0.577 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Pirellula
staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=nusG
PE=3 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=1.161"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8R5G6|E8R5G6_ISOPI ;
ALN/Q_length_ratio=0.606 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Isosphaera
pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=nusG PE=3
SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.088"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5SPQ8|D5SPQ8_PLAL2 ;
ALN/Q_length_ratio=0.600 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=nusG PE=3 SV=1 ; EVALUE=2e-35 ;
Q/S_length_ratio=1.520"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5UJB4|M5UJB4_9PLAN ;
ALN/Q_length_ratio=0.613 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
sallentina SM41 GN=nusG PE=3 SV=1 ; EVALUE=3e-34 ;
Q/S_length_ratio=1.319"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A3ZLI3|A3ZLI3_9PLAN ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Transcription
termination/antitermination protein NusG
OS=Blastopirellula marina DSM 3645 GN=nusG PE=3 SV=1 ;
EVALUE=3e-34 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5TQE0|M5TQE0_9PLAN ;
ALN/Q_length_ratio=0.613 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
sp. SWK7 GN=nusG PE=3 SV=1 ; EVALUE=1e-32 ;
Q/S_length_ratio=1.276"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5RMG5|M5RMG5_9PLAN ;
ALN/Q_length_ratio=0.574 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
maiorica SM1 GN=nusG PE=3 SV=1 ; EVALUE=6e-32 ;
Q/S_length_ratio=1.202"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F2AMX5|F2AMX5_RHOBT ;
ALN/Q_length_ratio=0.574 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
baltica WH47 GN=nusG PE=3 SV=1 ; EVALUE=1e-30 ;
Q/S_length_ratio=1.378"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5C9W7|K5C9W7_RHOBT ;
ALN/Q_length_ratio=0.574 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
baltica SH28 GN=nusG PE=3 SV=1 ; EVALUE=1e-30 ;
Q/S_length_ratio=1.378"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L7CIY0|L7CIY0_RHOBT ;
ALN/Q_length_ratio=0.574 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
baltica SWK14 GN=nusG PE=3 SV=1 ; EVALUE=1e-30 ;
Q/S_length_ratio=1.378"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q7UMY8|Q7UMY8_RHOBA ;
ALN/Q_length_ratio=0.574 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
baltica (strain SH1) GN=nusG PE=3 SV=1 ; EVALUE=1e-30 ;
Q/S_length_ratio=1.378"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M2BB56|M2BB56_9PLAN ;
ALN/Q_length_ratio=0.574 ; DESCRIPTION=Transcription
termination/antitermination protein NusG OS=Rhodopirellula
europaea 6C GN=nusG PE=3 SV=1 ; EVALUE=2e-30 ;
Q/S_length_ratio=1.378"
/note="Pfam_scan:hit_1 (109..227); Pfam:PF02357.14:NusG;
Pfam_type:Family;HMM_aln_Length:86; HMM_Length:92;
EVALUE:2.6e-12; BITSCORE: 46.8"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
BEGIN
1 MTEDTTDVPA TNEPEPATPV VDAQSNDAVS APAPAESEAQ ELIEPGDQLA ESVAEAEAAP
61 EMAEESQPTK KPRAARGSES EEEDEEPGPV PASDDDDEPA AEPVPESKKK WYAIKVQSGR
121 EDTIKAAILR KVAIEGLEEY FGQIMIPYEE VIEKKAVKVK DKKTGDTVTV ERKVTRKRKK
181 FQGYLFAELE FNDRILYLFR ETSGVGDFLN LRNKPNEAPT PEPMSDQEVQ QMLTGEKQAG
241 VDNKGKKIKI EFEKGDRVRI REGSFANSEG EVTAISEPKD PTDAPKITVV VTFWGRPLPV
301 ELEYWQVAKV
//