LOCUS VTR96637.1 293 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 50s ribosomal protein l1 : 50S ribosomal
protein L1 OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rplA PE=3 SV=
1: Ribosomal_L1 protein.
ACCESSION LR593886-5894
PROTEIN_ID VTR96637.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_11210"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D6B6|L0D6B6_SINAD ;
ALN/Q_length_ratio=0.700 ; DESCRIPTION=50S ribosomal
protein L1 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rplA PE=3
SV=1 ; EVALUE=8e-80 ; Q/S_length_ratio=1.302"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|X1B772|X1B772_9ZZZZ ;
ALN/Q_length_ratio=0.710 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L01479 OS=marine sediment
metagenome GN=S01H1_06388 PE=3 SV=1 ; EVALUE=9e-79 ;
Q/S_length_ratio=1.332"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G9YFX6|G9YFX6_9FIRM ;
ALN/Q_length_ratio=0.761 ; DESCRIPTION=50S ribosomal
protein L1 OS=Anaeroglobus geminatus F0357 GN=rplA PE=3
SV=1 ; EVALUE=1e-76 ; Q/S_length_ratio=1.231"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E2ZA52|E2ZA52_9FIRM ;
ALN/Q_length_ratio=0.754 ; DESCRIPTION=50S ribosomal
protein L1 OS=Megasphaera micronuciformis F0359 GN=rplA
PE=3 SV=1 ; EVALUE=4e-76 ; Q/S_length_ratio=1.231"
/note="BLAST_uniprot:hit_5 ; ACCESSION=A6LKQ6 ;
ALN/Q_length_ratio=0.693 ; DESCRIPTION=50S ribosomal
protein L1 OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=rplA PE=3 SV=1 ; EVALUE=4e-76 ;
Q/S_length_ratio=1.263"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZLI1|A3ZLI1_9PLAN ;
ALN/Q_length_ratio=0.696 ; DESCRIPTION=50S ribosomal
protein L1 OS=Blastopirellula marina DSM 3645 GN=rplA PE=3
SV=1 ; EVALUE=1e-75 ; Q/S_length_ratio=1.302"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R9LZN0|R9LZN0_9FIRM ;
ALN/Q_length_ratio=0.761 ; DESCRIPTION=50S ribosomal
protein L1 OS=Oscillibacter sp. 1-3 GN=rplA PE=3 SV=1 ;
EVALUE=3e-75 ; Q/S_length_ratio=1.274"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|R7FZS7|R7FZS7_9FIRM ;
ALN/Q_length_ratio=0.758 ; DESCRIPTION=50S ribosomal
protein L1 OS=Eubacterium sp. CAG:841 GN=rplA PE=3 SV=1 ;
EVALUE=1e-74 ; Q/S_length_ratio=1.268"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|R6TIV3|R6TIV3_9FIRM ;
ALN/Q_length_ratio=0.761 ; DESCRIPTION=50S ribosomal
protein L1 OS=Oscillibacter sp. CAG:155 GN=rplA PE=3 SV=1
; EVALUE=1e-74 ; Q/S_length_ratio=1.274"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E8R5G4|E8R5G4_ISOPI ;
ALN/Q_length_ratio=0.706 ; DESCRIPTION=50S ribosomal
protein L1 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rplA PE=3 SV=1 ; EVALUE=1e-74 ;
Q/S_length_ratio=1.291"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S7HL58|S7HL58_9FIRM ;
ALN/Q_length_ratio=0.693 ; DESCRIPTION=50S ribosomal
protein L1 OS=Megasphaera sp. NM10 GN=rplA PE=3 SV=1 ;
EVALUE=6e-74 ; Q/S_length_ratio=1.231"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|S7HPH7|S7HPH7_9FIRM ;
ALN/Q_length_ratio=0.693 ; DESCRIPTION=50S ribosomal
protein L1 OS=Megasphaera sp. BL7 GN=rplA PE=3 SV=1 ;
EVALUE=6e-74 ; Q/S_length_ratio=1.231"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F7YYC1|F7YYC1_9THEM ;
ALN/Q_length_ratio=0.761 ; DESCRIPTION=50S ribosomal
protein L1 OS=Thermotoga thermarum DSM 5069 GN=rplA PE=3
SV=1 ; EVALUE=7e-74 ; Q/S_length_ratio=1.231"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|R5VK00|R5VK00_9FIRM ;
ALN/Q_length_ratio=0.765 ; DESCRIPTION=50S ribosomal
protein L1 OS=Ruminococcus sp. CAG:254 GN=rplA PE=3 SV=1 ;
EVALUE=9e-74 ; Q/S_length_ratio=1.268"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U2QWP8|U2QWP8_9FIRM ;
ALN/Q_length_ratio=0.761 ; DESCRIPTION=50S ribosomal
protein L1 OS=Oscillibacter sp. KLE 1745 GN=rplA PE=3 SV=1
; EVALUE=1e-73 ; Q/S_length_ratio=1.274"
/note="Pfam_scan:hit_1 (65..288);
Pfam:PF00687.16:Ribosomal_L1;
Pfam_type:Domain;HMM_aln_Length:206; HMM_Length:220;
EVALUE:3e-50; BITSCORE: 170.6"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0006412"
BEGIN
1 MANDKEPAPA GDPVVAPAPT EAAVAAPTGG DKKPDAPEAP QVKKADALET PQVKKKPGVP
61 PRRGKKLRNH LKNVEKKLRD AGPVSVKQAV AELKKLKRAK FDETVEIHIN LGIDPTQSDQ
121 MVRGAIPLPH GIGKSVRVAV FCQGDNIEKA KAAGADVVGG ADLVEKVQKQ NFLDFDVALA
181 SQDMMGQVSR LGKVLGPRGL MPTPKAGTVV PATGDLASVV REFKAGKVEY RSDKTGQIHA
241 GVGKMSFDEQ KLVENITVFV EQIRSVKPSG VKGNFINGVV LSATMSAGIR LTV
//