LOCUS VTR96595.1 293 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Xylose isomerase domain protein TIM
barrel OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=Plim_1208 PE=4 SV=1:
AP_endonuc_2 protein.
ACCESSION LR593886-5873
PROTEIN_ID VTR96595.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_11420"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SUJ1|D5SUJ1_PLAL2 ;
ALN/Q_length_ratio=1.038 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_1208 PE=4 SV=1 ; EVALUE=5e-96 ;
Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F8EJC2|F8EJC2_RUNSL ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Runella
slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /
NCIMB 11436 / LSU 4) GN=Runsl_4067 PE=4 SV=1 ;
EVALUE=1e-77 ; Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2R436|D2R436_PIRSD ;
ALN/Q_length_ratio=0.901 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_4237 PE=4 SV=1
; EVALUE=1e-74 ; Q/S_length_ratio=1.097"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6DNM4|A6DNM4_9BACT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Uncharacterized
protein OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_18590
PE=4 SV=1 ; EVALUE=2e-74 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B9XT50|B9XT50_PEDPL ;
ALN/Q_length_ratio=1.048 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pedosphaera parvula (strain
Ellin514) GN=Cflav_PD0012 PE=4 SV=1 ; EVALUE=2e-73 ;
Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A4A1B1|A4A1B1_9PLAN ;
ALN/Q_length_ratio=1.020 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_20112 PE=4 SV=1 ; EVALUE=1e-72 ;
Q/S_length_ratio=0.893"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L0DM21|L0DM21_SINAD ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6342 PE=4 SV=1 ; EVALUE=3e-71 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|X1PMT9|X1PMT9_9ZZZZ ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S06H3_S01147 (Fragment) OS=marine
sediment metagenome GN=S06H3_27051 PE=4 SV=1 ;
EVALUE=2e-69 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|S8FGD9|S8FGD9_9BACT ;
ALN/Q_length_ratio=1.024 ; DESCRIPTION=Xylose
isomerase-like TIM barrel domain protein OS=Bacteroidetes
bacterium oral taxon 272 str. F0290 GN=HMPREF9012_1847
PE=4 SV=1 ; EVALUE=4e-66 ; Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A098C174|A0A098C174_9PORP ;
ALN/Q_length_ratio=1.075 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Porphyromonadaceae bacterium
ING2-E5B GN=ING2E5B_1423 PE=4 SV=1 ; EVALUE=2e-65 ;
Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I3ZLJ7|I3ZLJ7_TERRK ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Terriglobus roseus (strain DSM
18391 / NRRL B-41598 / KBS 63) GN=Terro_3906 PE=4 SV=1 ;
EVALUE=3e-65 ; Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A024KGV3|A0A024KGV3_9RHIZ ;
ALN/Q_length_ratio=0.874 ; DESCRIPTION=Uncharacterized
protein OS=Devosia sp. DDB001 PE=4 SV=1 ; EVALUE=9e-65 ;
Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A087LKR9|A0A087LKR9_9RHIZ ;
ALN/Q_length_ratio=0.874 ; DESCRIPTION=Xylose isomerase
OS=Devosia sp. 17-2-E-8 GN=JP74_20370 PE=4 SV=1 ;
EVALUE=9e-65 ; Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A6C491|A6C491_9PLAN ;
ALN/Q_length_ratio=0.904 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_25041
PE=4 SV=1 ; EVALUE=2e-64 ; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q02D23|Q02D23_SOLUE ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Solibacter usitatus (strain
Ellin6076) GN=Acid_0027 PE=4 SV=1 ; EVALUE=7e-64 ;
Q/S_length_ratio=1.021"
/note="Pfam_scan:hit_1 (56..249);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:211; HMM_Length:213;
EVALUE:4.2e-27; BITSCORE: 94.8"
BEGIN
1 MNRPLGRRDF LHTTAAVTAT AVTGSYLFSA EQKKPKLKKA VKYGMIQLKG THQERLELAK
61 KCGFLGVEID SPGTTKLDEL VKASKDTGVA IHGVIDSVHW TDTLSSPDEK VRAKGLEALK
121 GALEDAKTVG ADTVLLVPGV VNKEVSYEQC YERSQAEVRK VLPLAEKLKV KIAIEVVWNN
181 FITKPEQLVQ YVDDFKSEFV GAYFDCSNMV KYGVPSADWI RKLGKRMLKF DFKGYSKTKQ
241 WVAIGEGDED WPEILKALAE IGYNGWATSE VGGGGEEHLK KISAQMDKVL GLG
//