LOCUS       VTR96565.1               451 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana sigma-70 family rna polymerase sigma
            factor : RNA polymerase sigma factor, sigma-70 family
            OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
            18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1: Sigma70_r2:
            Sigma70_r4_2 protein.
ACCESSION   LR593886-5858
PROTEIN_ID  VTR96565.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_11570"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|L0DIU5|L0DIU5_SINAD ;
                     ALN/Q_length_ratio=0.630 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4592 PE=4 SV=1 ; EVALUE=5e-38 ;
                     Q/S_length_ratio=0.788"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|L0DM90|L0DM90_SINAD ;
                     ALN/Q_length_ratio=0.630 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-37 ;
                     Q/S_length_ratio=0.735"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|L0DKD8|L0DKD8_SINAD ;
                     ALN/Q_length_ratio=0.654 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4965 PE=4 SV=1 ; EVALUE=4e-35 ;
                     Q/S_length_ratio=0.505"
                     /note="BLAST_uniprot:hit_4 ;
                     ACCESSION=tr|L0DHB8|L0DHB8_SINAD ;
                     ALN/Q_length_ratio=0.729 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3834 PE=4 SV=1 ; EVALUE=1e-34 ;
                     Q/S_length_ratio=0.814"
                     /note="BLAST_uniprot:hit_5 ;
                     ACCESSION=tr|L0D6V6|L0D6V6_SINAD ;
                     ALN/Q_length_ratio=0.599 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0102 PE=4 SV=1 ; EVALUE=2e-33 ;
                     Q/S_length_ratio=0.805"
                     /note="BLAST_uniprot:hit_6 ;
                     ACCESSION=tr|L0DT29|L0DT29_SINAD ;
                     ALN/Q_length_ratio=0.563 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7487 PE=4 SV=1 ; EVALUE=3e-33 ;
                     Q/S_length_ratio=0.906"
                     /note="BLAST_uniprot:hit_7 ;
                     ACCESSION=tr|L0D7L2|L0D7L2_SINAD ;
                     ALN/Q_length_ratio=0.690 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0185 PE=4 SV=1 ; EVALUE=1e-32 ;
                     Q/S_length_ratio=0.900"
                     /note="BLAST_uniprot:hit_8 ;
                     ACCESSION=tr|L0DHG5|L0DHG5_SINAD ;
                     ALN/Q_length_ratio=0.698 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3888 PE=4 SV=1 ; EVALUE=9e-32 ;
                     Q/S_length_ratio=0.642"
                     /note="BLAST_uniprot:hit_9 ;
                     ACCESSION=tr|L0DJM8|L0DJM8_SINAD ;
                     ALN/Q_length_ratio=0.641 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4894 PE=4 SV=1 ; EVALUE=4e-31 ;
                     Q/S_length_ratio=1.023"
                     /note="BLAST_uniprot:hit_10 ;
                     ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ;
                     ALN/Q_length_ratio=0.647 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_5383 PE=4 SV=1 ; EVALUE=9e-30 ;
                     Q/S_length_ratio=1.414"
                     /note="BLAST_uniprot:hit_11 ;
                     ACCESSION=tr|L0DKL4|L0DKL4_SINAD ;
                     ALN/Q_length_ratio=0.705 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_5058 PE=4 SV=1 ; EVALUE=1e-29 ;
                     Q/S_length_ratio=0.470"
                     /note="BLAST_uniprot:hit_12 ;
                     ACCESSION=tr|L0DDR3|L0DDR3_SINAD ;
                     ALN/Q_length_ratio=0.694 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_2497 PE=4 SV=1 ; EVALUE=2e-29 ;
                     Q/S_length_ratio=0.409"
                     /note="BLAST_uniprot:hit_13 ;
                     ACCESSION=tr|L0DQA3|L0DQA3_SINAD ;
                     ALN/Q_length_ratio=0.670 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_6979 PE=4 SV=1 ; EVALUE=2e-29 ;
                     Q/S_length_ratio=1.013"
                     /note="BLAST_uniprot:hit_14 ;
                     ACCESSION=tr|L0DLI2|L0DLI2_SINAD ;
                     ALN/Q_length_ratio=0.601 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_5991 PE=4 SV=1 ; EVALUE=3e-29 ;
                     Q/S_length_ratio=0.624"
                     /note="BLAST_uniprot:hit_15 ;
                     ACCESSION=tr|L0DPR4|L0DPR4_SINAD ;
                     ALN/Q_length_ratio=0.780 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_6601 PE=4 SV=1 ; EVALUE=4e-29 ;
                     Q/S_length_ratio=0.744"
                     /note="Pfam_scan:hit_1 (40..107);
                     Pfam:PF04542.9:Sigma70_r2;
                     Pfam_type:Domain;HMM_aln_Length:67; HMM_Length:71;
                     EVALUE:2.8e-09; BITSCORE: 36.4"
                     /note="Pfam_scan:hit_2 (132..185);
                     Pfam:PF08281.7:Sigma70_r4_2;
                     Pfam_type:Domain;HMM_aln_Length:47; HMM_Length:54;
                     EVALUE:7.4e-08; BITSCORE: 31.7"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0001071"
                     /note="GO_domain:GO:0000988"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
                     /note="GO_domain:GO:0043234"
                     /note="GO_domain:GO:0005622"
BEGIN
        1 MPPRFLRLLS AAAPSGDVTS DAELLRKYVS TRDADAFELL VRRHADAVWN ACLRVLGNEA
       61 DAADAFQATF LVLTRRAATV RGTCAGGWLH RVAANTARRL RARHRPMVEA NFDETIAPGP
      121 ALGDRLERDE FAAAVHEELA QFPEHYRLPV VLCDLEGHAH SEAAKVLGWP VGSVSGRLSR
      181 AHAMLRARLA RRGFVAPVLF VACAVPSRIV QAAIGIGTGA IAAPTLVSHL TEGVLLSMHT
      241 AKMKVATLLA VGFLGAVGLG VVFAAEHPNA PTIAVAPTQD DDKPDPETDP KTTPDPKWAK
      301 GSTPTAFPEI PAITSKSLTD FEQKHIEPIF VGDPPLRKLL KMKLQRAVQK LADALDYVEN
      361 TKEPDSATNP IAFSNFHDKR LRLCTSLPSL MIEAQTIAFE LYPTAESRRP WLVLKVAVGK
      421 RVELIRHAPR DEAQAARLDA EIELARHDQK K
//