LOCUS VTR96514.1 441 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana efflux rnd mfp subunit : RND family
efflux transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6016 PE=4 SV=1: HlyD protein.
ACCESSION LR593886-5815
PROTEIN_ID VTR96514.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_12000"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DLK6|L0DLK6_SINAD ;
ALN/Q_length_ratio=0.884 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6016 PE=4 SV=1 ; EVALUE=1e-54 ;
Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F2AVB5|F2AVB5_RHOBT ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula baltica WH47
GN=RBWH47_01770 PE=4 SV=1 ; EVALUE=2e-53 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L7CDF0|L7CDF0_RHOBT ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula baltica SWK14
GN=RBSWK_04859 PE=4 SV=1 ; EVALUE=3e-53 ;
Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M2AKL6|M2AKL6_9PLAN ;
ALN/Q_length_ratio=0.832 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula europaea 6C
GN=RE6C_01625 PE=4 SV=1 ; EVALUE=4e-53 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K5EFE6|K5EFE6_RHOBT ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula baltica SH28
GN=RBSH_00060 PE=4 SV=1 ; EVALUE=4e-53 ;
Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SQK1|D5SQK1_PLAL2 ;
ALN/Q_length_ratio=0.844 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_2639 PE=4 SV=1 ; EVALUE=5e-53 ;
Q/S_length_ratio=1.011"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5RWQ7|M5RWQ7_9PLAN ;
ALN/Q_length_ratio=0.832 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula europaea SH398
GN=RESH_05702 PE=4 SV=1 ; EVALUE=5e-53 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D5SNK5|D5SNK5_PLAL2 ;
ALN/Q_length_ratio=0.859 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_2293 PE=4 SV=1 ; EVALUE=3e-51 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B1LZ10|B1LZ10_METRJ ;
ALN/Q_length_ratio=0.832 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Methylobacterium radiotolerans
(strain ATCC 27329 / DSM 1819 / JCM 2831) GN=Mrad2831_2436
PE=4 SV=1 ; EVALUE=2e-50 ; Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M7Z404|M7Z404_9RHIZ ;
ALN/Q_length_ratio=0.864 ; DESCRIPTION=RND family efflux
transporter MFP subunit OS=Methylobacterium mesophilicum
SR1.6/6 GN=MmSR116_1352 PE=4 SV=1 ; EVALUE=8e-49 ;
Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W7GJ79|W7GJ79_STEMA ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=AcrA
OS=Stenotrophomonas maltophilia 5BA-I-2 GN=X548_06615 PE=4
SV=1 ; EVALUE=9e-49 ; Q/S_length_ratio=1.084"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A031H1Q4|A0A031H1Q4_9GAMM ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=RND multidrug
efflux membrane fusion protein OS=Stenotrophomonas sp.
RIT309 GN=mexE_1 PE=4 SV=1 ; EVALUE=9e-49 ;
Q/S_length_ratio=1.084"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A095URU1|A0A095URU1_9GAMM ;
ALN/Q_length_ratio=0.773 ; DESCRIPTION=Secretion protein
HlyD OS=Alcanivorax sp. 19-m-6 GN=Y5S_01669 PE=4 SV=1 ;
EVALUE=8e-48 ; Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A087FS41|A0A087FS41_KLEVA ;
ALN/Q_length_ratio=0.746 ; DESCRIPTION=Acriflavin
resistance protein AcrA OS=Klebsiella variicola
GN=BF23_08300 PE=4 SV=1 ; EVALUE=1e-47 ;
Q/S_length_ratio=1.128"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A061JL53|A0A061JL53_PSEST ;
ALN/Q_length_ratio=0.812 ; DESCRIPTION=AcrA OS=Pseudomonas
stutzeri KOS6 GN=B597_020840 PE=4 SV=1 ; EVALUE=2e-47 ;
Q/S_length_ratio=1.142"
/note="Pfam_scan:hit_1 (62..295); Pfam:PF00529.15:HlyD;
Pfam_type:Family;HMM_aln_Length:225; HMM_Length:305;
EVALUE:3.5e-21; BITSCORE: 75.8"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MYHRRIGLSA VLLAAASALA GCQPAKPEAP KFPAPVVTVV RPAVVPVRDY WVYNGYLDTT
61 KAVEVRSKIR GFLKDVKFIE GTEVAANTPL YTIDKLEYET SVKKAAAELL KSEAQIKSWE
121 AQIVQSRADL DRVNRLGAGG IESKFREEEA RATLDVRIAE LKAAEANRDA AKAALHSAEI
181 LLGYTDIRAK IGGRISRTLV DEGNLVQADT TLLTTIVQVD KLYVYYDAPE SDFLAYQKTL
241 IKSSSPSLST QQIGLEVGVG DEMDFPHEGF IDFRENRVET ATGTIRVRGR LDNPVLSNGV
301 RLLYPGMFAR IRVPKSDKVP TPVIPEDCLL SGQEGRFVFV VNPEGIVKKR LVTVGANFWK
361 IPTTEPGVAV PSWVAVNPKP APPKEGQPPA ETRKNIKSVV AITAGLKPDD RVILAGLHAV
421 RPDAPAVPDE WVLNPPVESK K
//