LOCUS VTR96481.1 1116 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana wd-40 repeat protein : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: WD40: WD40: WD40
protein.
ACCESSION LR593886-5782
PROTEIN_ID VTR96481.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_12330"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0YMI4|A0YMI4_LYNSP ;
ALN/Q_length_ratio=0.522 ; DESCRIPTION=WD-40 repeat
protein OS=Lyngbya sp. (strain PCC 8106) GN=L8106_17667
PE=4 SV=1 ; EVALUE=6e-53 ; Q/S_length_ratio=0.816"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B2IXC4|B2IXC4_NOSP7 ;
ALN/Q_length_ratio=0.517 ; DESCRIPTION=WD-40 repeat
protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=Npun_F1222 PE=4 SV=1 ; EVALUE=1e-52 ;
Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K9V395|K9V395_9CYAN ;
ALN/Q_length_ratio=0.517 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_2739 PE=4 SV=1 ; EVALUE=2e-51 ;
Q/S_length_ratio=0.700"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D7BXH8|D7BXH8_STRBB ;
ALN/Q_length_ratio=0.514 ; DESCRIPTION=Putative WD-40
repeat protein OS=Streptomyces bingchenggensis (strain
BCW-1) GN=SBI_04631 PE=4 SV=1 ; EVALUE=2e-47 ;
Q/S_length_ratio=0.862"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|C7RS72|C7RS72_ACCPU ;
ALN/Q_length_ratio=0.520 ; DESCRIPTION=WD-40 repeat
protein OS=Accumulibacter phosphatis (strain UW-1)
GN=CAP2UW1_2609 PE=4 SV=1 ; EVALUE=7e-47 ;
Q/S_length_ratio=0.642"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K7W4U6|K7W4U6_9NOST ;
ALN/Q_length_ratio=0.603 ; DESCRIPTION=WD-40
repeat-containing protein OS=Anabaena sp. 90 GN=ANA_C12029
PE=4 SV=1 ; EVALUE=8e-47 ; Q/S_length_ratio=0.694"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E0UJ20|E0UJ20_CYAP2 ;
ALN/Q_length_ratio=0.522 ; DESCRIPTION=WD40 repeat,
subgroup OS=Cyanothece sp. (strain PCC 7822)
GN=Cyan7822_2631 PE=4 SV=1 ; EVALUE=1e-46 ;
Q/S_length_ratio=0.879"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A084Y8X0|A0A084Y8X0_9CYAN ;
ALN/Q_length_ratio=0.517 ; DESCRIPTION=Uncharacterized
protein OS=Calothrix sp. 336/3 GN=IJ00_01065 PE=4 SV=1 ;
EVALUE=1e-46 ; Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|E4TH64|E4TH64_CALNY ;
ALN/Q_length_ratio=0.521 ; DESCRIPTION=WD40 repeat,
subgroup OS=Calditerrivibrio nitroreducens (strain DSM
19672 / NBRC 101217 / Yu37-1) GN=Calni_0847 PE=4 SV=1 ;
EVALUE=2e-46 ; Q/S_length_ratio=1.058"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|H5SRM7|H5SRM7_9BACT ;
ALN/Q_length_ratio=0.534 ; DESCRIPTION=Hypothetical
conserved protein OS=Candidatus Acetothermus autotrophicum
GN=HGMM_OP2C292 PE=4 SV=1 ; EVALUE=5e-45 ;
Q/S_length_ratio=1.187"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S9PCE9|S9PCE9_9DELT ;
ALN/Q_length_ratio=0.518 ; DESCRIPTION=Uncharacterized
protein OS=Cystobacter fuscus DSM 2262 GN=D187_009953 PE=4
SV=1 ; EVALUE=2e-44 ; Q/S_length_ratio=0.490"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K9UX17|K9UX17_9CYAN ;
ALN/Q_length_ratio=0.435 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_1366 PE=4 SV=1 ; EVALUE=3e-44 ;
Q/S_length_ratio=1.771"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A5URP9|A5URP9_ROSS1 ;
ALN/Q_length_ratio=0.580 ; DESCRIPTION=Ribosome assembly
protein 4 (RSA4) OS=Roseiflexus sp. (strain RS-1)
GN=RoseRS_0892 PE=4 SV=1 ; EVALUE=8e-44 ;
Q/S_length_ratio=1.603"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K9TKV8|K9TKV8_9CYAN ;
ALN/Q_length_ratio=0.419 ; DESCRIPTION=WD40
repeat-containing protein OS=Oscillatoria acuminata PCC
6304 GN=Oscil6304_3065 PE=3 SV=1 ; EVALUE=2e-43 ;
Q/S_length_ratio=1.287"
/note="Pfam_scan:hit_1 (45..117);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71;
EVALUE:1.4e-07; BITSCORE: 30.9"
/note="Pfam_scan:hit_2 (143..195);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:48; HMM_Length:54;
EVALUE:2.2e-11; BITSCORE: 43.0"
/note="Pfam_scan:hit_3 (508..541); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:26; HMM_Length:39;
EVALUE:0.00038; BITSCORE: 20.2"
/note="Pfam_scan:hit_4 (874..896); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:39;
EVALUE:0.00024; BITSCORE: 20.8"
/note="Pfam_scan:hit_5 (902..938); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:33; HMM_Length:39;
EVALUE:1.1e-07; BITSCORE: 31.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSVTATPAFA EVMRQLTDGL RPDRVRDADL LADFVTDQNT GFADLVARHG PLVWGVCRRG
61 LTDPNDAEDA FQATFLALAR QARSLADRVS GHETLAGWLH LTARRITHNV RRARTRRCEH
121 ERRAAAERET QADLVVEPGA LGSVLDEELA RLPARFRETI VLCYFQGKTH ADAARQLGCP
181 VGSVSSRLAR GCELLRDALA RRGVTLSIGL VTVAVAVAGA GGHAGAALPP GLIQSTITAA
241 RAFAVGGPAT TEPGRLALGV VQAKSGLRGK ISGLVVVVAL GMTLAAAMVS QKPVHADGPT
301 VANPTTAPET QPRTDSSGDP LPEGAVARLG TLRFRTGQMG TAASVAFGPD GKQLISAHGA
361 DVLYVWEPAS GRELRRLDAP QICSGVSTTP NGRRMIAVGH AEVWAWDLAA NQPLVLWKTK
421 IGRLIRANAE ISPDGRWVAV GGETKGNVIL LDAATGDEVR TLSVGGSGFA FSSDSKLIAV
481 WAKAPSLNAG TKTDVTVWNV TDGKLRYTVP FANTTVTSVA FAPDGKAVAT VAEDRRLQLW
541 DADSGKAQSK LAEDADPHSS VGFLKDGTLV EASAGRIRFW NPTTGKQSKP AIKTTDTADV
601 YRLSADGTQL AGAGLFGVSL HEVASGREIG TTAGMPDGLV HSVTFTPDSS AMVMAVYSES
661 AGAALHLWDA KDGRLRRRTE VGPRQIVWGV DVAADGTVSA ACVPLYQMPQ PPTRIVTWDA
721 DLARVRATFS LPTGVRCGAA SPDKRLIAIS TGERVILCDR TTGKEVRTLP GKCEATSLVF
781 SADGSCLGAL DPTAKRVTVW SLVDKRDKPW VWSPAPVMGK AADIRAPLAL SPDGRMFAVN
841 ATGMHGSVSV IETATGTELW HADAHLSGLP AQEFAFAPDG RTLAAAGTDG TVRVWEVASG
901 GERYRFAGHR AGVFSVAYSP DSRRLASASY DSTALVWDVV TLPRATSTGK APLGDPWLVL
961 AGRDTTAATR AIAALADAPD TAIPLLRTKL TPPPAAKPEQ VRQWLADLGA DDFKARETAS
1021 RELSLRGDLV LPDLRRALAN AEVAEVRSRL ERLINRLGAQ SPDRRAVIRG IEALERMGTN
1081 PDSQRLLREL AEAPAESVLG REARAAYRRL TAPSPQ
//