LOCUS VTR96466.1 312 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Xylose isomerase domain protein TIM
barrel OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=Plim_2642 PE=1 SV=1:
AP_endonuc_2 protein.
ACCESSION LR593886-5767
PROTEIN_ID VTR96466.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_12480"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SQK4|D5SQK4_PLAL2 ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_2642 PE=1 SV=1 ; EVALUE=1e-125 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R992|D2R992_PIRSD ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2977 PE=4 SV=1
; EVALUE=1e-119 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A4A1M6|A4A1M6_9PLAN ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_04760 PE=4 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=1.043"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6C2T6|A6C2T6_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09504
PE=4 SV=1 ; EVALUE=1e-117 ; Q/S_length_ratio=0.920"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D0MJG9|D0MJG9_RHOM4 ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodothermus marinus (strain
ATCC 43812 / DSM 4252 / R-10) GN=Rmar_1743 PE=4 SV=1 ;
EVALUE=1e-116 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|G2SFA9|G2SFA9_RHOMR ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Rhodothermus
marinus SG0.5JP17-172 GN=Rhom172_1714 PE=4 SV=1 ;
EVALUE=1e-112 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F4C1Z0|F4C1Z0_SPHS2 ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Sphingobacterium
sp. (strain 21) GN=Sph21_2944 PE=4 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=1.040"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A6DRY6|A6DRY6_9BACT ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Uncharacterized
protein OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_08061
PE=4 SV=1 ; EVALUE=1e-109 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7CQ18|L7CQ18_RHOBT ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica SWK14
GN=RBSWK_00148 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q7UHZ9|Q7UHZ9_RHOBA ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB12844 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K5CDV2|K5CDV2_RHOBT ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica SH28
GN=RBSH_02828 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5SR66|M5SR66_9PLAN ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula europaea SH398
GN=RESH_00673 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=0.825"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|X5DHD8|X5DHD8_9BACT ;
ALN/Q_length_ratio=0.946 ; DESCRIPTION=Xylose isomerase
OS=Draconibacterium orientale GN=FH5T_10450 PE=4 SV=1 ;
EVALUE=1e-108 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2ALE3|F2ALE3_RHOBT ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica WH47
GN=RBWH47_01655 PE=4 SV=1 ; EVALUE=1e-108 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M2B0N3|M2B0N3_9PLAN ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula europaea 6C
GN=RE6C_00809 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=0.825"
/note="Pfam_scan:hit_1 (61..269);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:185; HMM_Length:213;
EVALUE:5.3e-19; BITSCORE: 68.3"
BEGIN
1 MRSLSRRDFL AASAAVGGVA LLPRLGRAAE PAELFKISLA QWSLHRALFA KKLDALKFAE
61 ITAKEYGING VEYVNQFYKD KKKDDGYLKD LKKVADDNKV VSVLIMCDGE GNLGDPDEKK
121 RAAAVENHKR WTEWAKFLGC HSIRVNAASD WKKGFAETQK LAADGLRKLA EFTDTLGINT
181 IVENHGGLSS HGEWLAGVMK QVDHKRCGTL PDFGNFNIGK IEGVKETAYD RYKGVDELMP
241 YAKGVSAKTH DFDDKGNETH TDYRKMMELV VKKYKYHGFV GIEYEGGKIG EPEGIKATKK
301 LLETVRAELA KG
//