LOCUS VTR96436.1 994 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pas domain s-box : Uncharacterized
protein OS=uncultured bacterium GN=ACD_75C00961G0003 PE=
4 SV=1: PAS_9: PAS_4: PAS_8: PAS_9: HisKA: HATPase_c:
Response_reg protein.
ACCESSION LR593886-5737
PROTEIN_ID VTR96436.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_12780"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q74DA3|Q74DA3_GEOSL ;
ALN/Q_length_ratio=0.820 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS, PAS and PAS
domain-containing OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=GSU1414 PE=1 SV=1 ;
EVALUE=1e-112 ; Q/S_length_ratio=1.178"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D7AIK0|D7AIK0_GEOSK ;
ALN/Q_length_ratio=0.820 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS, PAS and PAS
domain-containing OS=Geobacter sulfurreducens (strain DL-1
/ KN400) GN=KN400_1442 PE=4 SV=2 ; EVALUE=1e-112 ;
Q/S_length_ratio=1.178"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|K1YL43|K1YL43_9BACT ;
ALN/Q_length_ratio=0.838 ; DESCRIPTION=Uncharacterized
protein OS=uncultured bacterium GN=ACD_75C00961G0003 PE=4
SV=1 ; EVALUE=1e-112 ; Q/S_length_ratio=1.123"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I4C8N8|I4C8N8_DESTA ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=PAS domain S-box
OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 /
DCB-1) GN=Desti_3271 PE=4 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=0.813"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B9M7B6|B9M7B6_GEODF ;
ALN/Q_length_ratio=0.572 ; DESCRIPTION=Response receiver
sensor histidine kinase response regulator, PAS
domain-containing OS=Geobacter daltonii (strain DSM 22248
/ JCM 15807 / FRC-32) GN=Geob_1847 PE=4 SV=1 ;
EVALUE=1e-109 ; Q/S_length_ratio=1.504"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B9XGY9|B9XGY9_PEDPL ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD4079 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K1YQU3|K1YQU3_9BACT ;
ALN/Q_length_ratio=0.753 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=uncultured bacterium
GN=ACD_75C00374G0005 PE=4 SV=1 ; EVALUE=1e-105 ;
Q/S_length_ratio=1.293"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B4CYF0|B4CYF0_9BACT ;
ALN/Q_length_ratio=0.666 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_1688 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A090KHT0|A0A090KHT0_9BACT ;
ALN/Q_length_ratio=0.646 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=1.481"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|I4C8M7|I4C8M7_DESTA ;
ALN/Q_length_ratio=0.850 ; DESCRIPTION=PAS domain S-box
OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 /
DCB-1) GN=Desti_3259 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K9UUR0|K9UUR0_9CYAN ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_0198 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=1.303"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I4C4P0|I4C4P0_DESTA ;
ALN/Q_length_ratio=0.790 ; DESCRIPTION=PAS domain S-box
OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 /
DCB-1) GN=Desti_1823 PE=4 SV=1 ; EVALUE=3e-99 ;
Q/S_length_ratio=0.733"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|G2LDN2|G2LDN2_CHLTF ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=Histidine kinase
OS=Chloracidobacterium thermophilum (strain B)
GN=Cabther_A2152 PE=4 SV=1 ; EVALUE=5e-95 ;
Q/S_length_ratio=1.208"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B5EDF4|B5EDF4_GEOBB ;
ALN/Q_length_ratio=0.870 ; DESCRIPTION=Histidine kinase
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_2137 PE=4 SV=1 ; EVALUE=6e-95 ;
Q/S_length_ratio=0.789"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B4D2K7|B4D2K7_9BACT ;
ALN/Q_length_ratio=0.729 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_3132 PE=4 SV=1 ; EVALUE=2e-94 ;
Q/S_length_ratio=0.954"
/note="Pfam_scan:hit_1 (92..201); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:96; HMM_Length:104;
EVALUE:1.4e-22; BITSCORE: 80.0"
/note="Pfam_scan:hit_2 (220..336); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:104; HMM_Length:110;
EVALUE:1e-11; BITSCORE: 44.7"
/note="Pfam_scan:hit_3 (346..412); Pfam:PF13188.1:PAS_8;
Pfam_type:Domain;HMM_aln_Length:38; HMM_Length:64;
EVALUE:2.5e-08; BITSCORE: 33.4"
/note="Pfam_scan:hit_4 (480..584); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:101; HMM_Length:104;
EVALUE:7.4e-15; BITSCORE: 55.2"
/note="Pfam_scan:hit_5 (600..664); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:68;
EVALUE:3.3e-06; BITSCORE: 26.9"
/note="Pfam_scan:hit_6 (705..829);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:111;
EVALUE:2.7e-20; BITSCORE: 72.1"
/note="Pfam_scan:hit_7 (874..983);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:111; HMM_Length:112;
EVALUE:7.1e-17; BITSCORE: 61.4"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MTFSPPNKPF PWLPAALVVV VAGGAAVCAT AVPQPISGPL VGVLVIGAAA LGWWANRSAP
61 ATRSVINTGP HDTLSESETR LRLLESAVVH AHDAVAIVEA RPGEGPGRSV MYVNEAFCRL
121 TGYARADVIG RSLYMLRGAG SDPDTLARLG AAMNSGTPLR VELRNYRKDG TPFWVDLSAV
181 PVPDPEGKLS HWVMIQRDID RRKSAERRAR QTGQLLRAII DAFPGPISAK DRDSRYLVMN
241 QFQAELLGVT PEDAVGRTAA ELVDATYGAM TVERDREVMS TCRPVQFEAR YPAPIGDGRP
301 WLTSKAPLWM PDGVDSEPAG ARGVVTVALD ISALKAAEDA LRRSEERYRQ LFRAVPHPVF
361 VYDTQTLRIL AVNEAAIRKY GYTRDEFLTL TVPDIRLADE VSYSLASAGD SSLPDGPPAI
421 RRHRTRTGAL IHVEVSSFAL SLEGRGVKLA LVNDVTERRK AEEELRRSEE LFRGIFESTS
481 AGVSLTNAEG LFVSCNPAFA AMLGRTVPEV LQLTPASLTH PDDLAEQQIL LEEVRTGARD
541 RFSYSKRYIR PDGQIIWAEL SFAAVRNAAG EYEYGLGVSV NVTERRLLED QLRQAQKMEA
601 IGQMAGGVAH DFNNLLTAVL GNLSLVRLPD HDPNRPLLTA VEQAAARAAD LTRKLLGYAR
661 RNQLVFAPVE PRDALGEVMA LLRHTVDPRI HLALEIDPDC PPVHADPTLL VQAVMNLGLN
721 ARDAMPDGGT LTFTAEPVNL HENDPRPAGW DDVRPGRYVR LAVSDTGTGM TPEVQARLFE
781 PFFTTKAIGK GTGLGLPMVH GIVKQHHGWI EIYSNPGIGT RIELNLPMSE LMATPSRAHA
841 RTPLPIPIPA PFPVLAPSAP TPARALNAPT PATILLVDDE QMIRDLGTAV LTRAGYRVIT
901 AEDGQEAVET FQREFADIAL VILDVTMPRM SGSDASRHMI RIDPNVRVLF STGYSADDLA
961 ELDGSQGLLS KPYRPQELVA AVRAALTITP QPVG
//