LOCUS VTR96435.1 644 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 3-octaprenyl-4-hydroxybenzoate carboxy-
lyase : 3-polyprenyl-4-hydroxybenzoate decarboxylase-like
protein OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1695 PE=
4 SV=1: UbiD: UbiD protein.
ACCESSION LR593886-5736
PROTEIN_ID VTR96435.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_12790"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5SN16|D5SN16_PLAL2 ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=UbiD family
decarboxylase OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_4242 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q1JZJ1|Q1JZJ1_DESAC ;
ALN/Q_length_ratio=0.947 ;
DESCRIPTION=Carboxylyase-related protein OS=Desulfuromonas
acetoxidans DSM 684 GN=Dace_1438 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E8WPX0|E8WPX0_GEOS8 ;
ALN/Q_length_ratio=0.950 ;
DESCRIPTION=Carboxylyase-related protein OS=Geobacter sp.
(strain M18) GN=GM18_2534 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A5GF27|A5GF27_GEOUR ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=UbiD family
decarboxylase OS=Geobacter uraniireducens (strain Rf4)
GN=Gura_1842 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|C6E5M5|C6E5M5_GEOSM ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=UbiD family
decarboxylase OS=Geobacter sp. (strain M21) GN=GM21_1579
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B9M3H0|B9M3H0_GEODF ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=UbiD family
decarboxylase OS=Geobacter daltonii (strain DSM 22248 /
JCM 15807 / FRC-32) GN=Geob_3048 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A068JMX8|A0A068JMX8_9DELT ;
ALN/Q_length_ratio=0.961 ;
DESCRIPTION=3-octaprenyl-4-hydroxybenzoate carboxy-lyase
OS=Desulfonatronum thiodismutans GN=GY33_02075 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A1AR74|A1AR74_PELPD ;
ALN/Q_length_ratio=0.950 ;
DESCRIPTION=Carboxylyase-related protein OS=Pelobacter
propionicus (strain DSM 2379) GN=Ppro_2237 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A6C720|A6C720_9PLAN ;
ALN/Q_length_ratio=0.944 ;
DESCRIPTION=Carboxylyase-related protein OS=Planctomyces
maris DSM 8797 GN=PM8797T_04030 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D2R8B6|D2R8B6_PIRSD ;
ALN/Q_length_ratio=0.935 ;
DESCRIPTION=Carboxylyase-related protein OS=Pirellula
staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128)
GN=Psta_1050 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R1X4|E8R1X4_ISOPI ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=UbiD family
decarboxylase OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_1824 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A3ZTY2|A3ZTY2_9PLAN ;
ALN/Q_length_ratio=0.938 ;
DESCRIPTION=Carboxylyase-related protein
OS=Blastopirellula marina DSM 3645 GN=DSM3645_05450 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F0SQX5|F0SQX5_PLABD ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=UbiD family
decarboxylase OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_2596 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B5EHC8|B5EHC8_GEOBB ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=UbiD family
decarboxylase OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=Gbem_2656 PE=4 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DBN6|L0DBN6_SINAD ;
ALN/Q_length_ratio=0.944 ;
DESCRIPTION=3-polyprenyl-4-hydroxybenzoate
decarboxylase-like protein OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_1695 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.057"
/note="Pfam_scan:hit_1 (10..256); Pfam:PF01977.11:UbiD;
Pfam_type:Family;HMM_aln_Length:225; HMM_Length:407;
EVALUE:4.1e-63; BITSCORE: 213.2"
/note="Pfam_scan:hit_2 (273..464); Pfam:PF01977.11:UbiD;
Pfam_type:Family;HMM_aln_Length:176; HMM_Length:407;
EVALUE:1.9e-54; BITSCORE: 184.7"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0051186"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0016829"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0005886"
BEGIN
1 MGHRNLSAAV ADLERAGHLV RIEQEIDPHL EAAEIHRRVY ATGGPAIYFA RTKGSPFPMV
61 SNLFGTVERA RFLFRDALDG VRKLVELKTD PASARKRPWR YWNLPLLAWR LRPKFVRSGP
121 ILKHTTTVSQ LPQLKCWPLD GGAFVTLPQV YTEHPDTPGW MKSNLGMYRV QLSGNEFEPD
181 REVGLHYQIH RGIGVHHAAA VRRGERLRVN VIVGGPPALA VAAVMPLPEG LPELAFAGAL
241 GGRRLTVVRP NPQTPSPKKE GGFQSPSPLG GGVGEGFSLP LPAEADFVIS GWIDPTRTKP
301 EGPFGDHLGY YSLTHDFPVM TVDAVYHRPG AIWPFTVVGR PPQEDTTFGE LIHELTGPVI
361 PTVIPGLHAV HAVDAAGVHP LLLAIGSERY VPYAGTRRPQ ELLTLANAVL GQGQLSLAKY
421 LFIVAKEDNP DLDIHDIGAF LRHLLERFDP EADLHFQTRT TIDTLDYSAG LGLNAGSKLV
481 IAAAGPARRA LGTTVPANLG LPDGFADPRL VMPGVLAILG PKCGARIDED VDIARLLTSL
541 NAAFCVSHSA FEGLPLIVVV DDSEFVARTL NNFLWAVFTR SDPATDVHGV VASMRHKHWG
601 CRGPLVIDAR LKPHMPPPLD ADPAVTRRVD ALFARGGPLS GLEK
//