LOCUS VTR96421.1 501 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana efflux rnd mfp subunit : Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula europaea SH398
GN=RESH_06318 PE=4 SV=1: HlyD_2 protein.
ACCESSION LR593886-5722
PROTEIN_ID VTR96421.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_12930"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5RUR9|M5RUR9_9PLAN ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula europaea SH398
GN=RESH_06318 PE=4 SV=1 ; EVALUE=1e-91 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M2AGY6|M2AGY6_9PLAN ;
ALN/Q_length_ratio=0.870 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula europaea 6C
GN=RE6C_02760 PE=4 SV=1 ; EVALUE=1e-81 ;
Q/S_length_ratio=0.936"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5SRZ3|M5SRZ3_9PLAN ;
ALN/Q_length_ratio=0.870 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula europaea SH398
GN=RESH_00368 PE=4 SV=1 ; EVALUE=2e-81 ;
Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5SWR7|D5SWR7_PLAL2 ;
ALN/Q_length_ratio=0.906 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_1584 PE=4 SV=1 ; EVALUE=7e-77 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DQW7|L0DQW7_SINAD ;
ALN/Q_length_ratio=0.880 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7341 PE=4 SV=1 ; EVALUE=5e-47 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6C3M8|A6C3M8_9PLAN ;
ALN/Q_length_ratio=0.856 ; DESCRIPTION=Cobalt-zinc-cadmium
resistance protein OS=Planctomyces maris DSM 8797
GN=PM8797T_26685 PE=4 SV=1 ; EVALUE=5e-46 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DQG4|L0DQG4_SINAD ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7109 PE=4 SV=1 ; EVALUE=5e-46 ;
Q/S_length_ratio=0.903"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5S240|M5S240_9PLAN ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Cobalt-zinc-cadmium
resistance protein OS=Rhodopirellula europaea SH398
GN=RESH_03828 PE=4 SV=1 ; EVALUE=2e-43 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K5CJY7|K5CJY7_RHOBT ;
ALN/Q_length_ratio=0.858 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula baltica SH28
GN=RBSH_00259 PE=4 SV=1 ; EVALUE=2e-41 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q7UEM9|Q7UEM9_RHOBA ;
ALN/Q_length_ratio=0.796 ; DESCRIPTION=Cobalt-zinc-cadmium
resistance protein OS=Rhodopirellula baltica (strain SH1)
GN=czcB PE=4 SV=1 ; EVALUE=6e-41 ; Q/S_length_ratio=1.231"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2B1G4|F2B1G4_RHOBT ;
ALN/Q_length_ratio=0.858 ; DESCRIPTION=Secretion protein
HlyD OS=Rhodopirellula baltica WH47 GN=RBWH47_05082 PE=4
SV=1 ; EVALUE=6e-41 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2A6Q2|M2A6Q2_9PLAN ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Secretion protein
HlyD OS=Rhodopirellula europaea 6C GN=RE6C_02936 PE=4 SV=1
; EVALUE=7e-41 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L7CD65|L7CD65_RHOBT ;
ALN/Q_length_ratio=0.858 ; DESCRIPTION=Secretion protein
HlyD OS=Rhodopirellula baltica SWK14 GN=RBSWK_05025 PE=4
SV=1 ; EVALUE=7e-40 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M1YWI2|M1YWI2_NITG3 ;
ALN/Q_length_ratio=0.848 ; DESCRIPTION=Putative Efflux
transporter, RND family, MFP subunit OS=Nitrospina
gracilis (strain 3/211) GN=NITGR_170105 PE=4 SV=1 ;
EVALUE=4e-39 ; Q/S_length_ratio=0.831"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5SV97|M5SV97_9PLAN ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula sp. SWK7
GN=RRSWK_06775 PE=4 SV=1 ; EVALUE=8e-38 ;
Q/S_length_ratio=0.969"
/note="Pfam_scan:hit_1 (89..483); Pfam:PF12700.2:HlyD_2;
Pfam_type:Family;HMM_aln_Length:305; HMM_Length:328;
EVALUE:3.4e-17; BITSCORE: 62.5"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MSEVIIRREP ASGALPARVR RWWIAALLFL VLGAGGAGVI ASGALRAPSP AKPDDSEKRA
61 ESAKDTITMA KDKLSAAGVD TALVSAAPLR VNTWRTGRVA LNDERVAHIC PPVEGIVREV
121 PVRLGHNVAA GDVLVVIDCR ELSSLKLELV RARAALATER EAATRTRTTT TNAAELLKLL
181 AADTPLTEIE KKLTDKPIGD WRAQLLGAYT RKEQLRTQLA SLRSSAGAVP ESVALKVQSE
241 TDAASATYTS LVEDLRYQVK YQVRQAELKL REAETAVDIT RAKLVALGLV TETIDTLDPL
301 AEGAKASLLT IRAPFAGTVV EKHVVLSERV GPQSQLFVLS DLSTVWIQAD VFEADLPLIR
361 RLTGRTIAFR SELAGIPERT ATVVYTGDVI DKSSRTLTLT AETPNPERAL KPGTMVEVGF
421 DTGTSDPVIQ VPASAVFRHE NKPFVFVVTG TDTFTKREVA LGRQAGDAVE ITDGVRVGEA
481 VVVRGGFVLK SELLKDQMVG E
//