LOCUS VTR96356.1 713 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pas pac sensor hybrid histidine kinase
: PAS/PAC sensor hybrid histidine kinase OS=Haliangium
ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) GN=Hoch_2685
PE=4 SV=1: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg
protein.
ACCESSION LR593886-5657
PROTEIN_ID VTR96356.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_13580"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D0LM37|D0LM37_HALO1 ;
ALN/Q_length_ratio=0.696 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Haliangium ochraceum (strain
DSM 14365 / JCM 11303 / SMP-2) GN=Hoch_2685 PE=4 SV=1 ;
EVALUE=1e-108 ; Q/S_length_ratio=1.080"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B5EFB5|B5EFB5_GEOBB ;
ALN/Q_length_ratio=0.874 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS and PAS domain-containing
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_3878 PE=4 SV=1 ; EVALUE=1e-106 ;
Q/S_length_ratio=1.059"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q1INJ5|Q1INJ5_KORVE ;
ALN/Q_length_ratio=0.675 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_2554 PE=4 SV=1 ; EVALUE=1e-105 ;
Q/S_length_ratio=1.294"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|C6E8J1|C6E8J1_GEOSM ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter sp. (strain M21)
GN=GM21_3966 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B5EBI9|B5EBI9_GEOBB ;
ALN/Q_length_ratio=0.843 ; DESCRIPTION=Sensor histidine
kinase response regulator, Cache_1, PAS and PAS
domain-containing OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=Gbem_0429 PE=4 SV=1 ;
EVALUE=1e-102 ; Q/S_length_ratio=0.747"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|C6DZ31|C6DZ31_GEOSM ;
ALN/Q_length_ratio=0.843 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter sp. (strain M21)
GN=GM21_0452 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=0.747"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|E8WIP1|E8WIP1_GEOS8 ;
ALN/Q_length_ratio=0.914 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter sp. (strain M18)
GN=GM18_4310 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=1.069"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W0RQW6|W0RQW6_9BACT ;
ALN/Q_length_ratio=0.787 ; DESCRIPTION=PAS sensor protein
OS=Gemmatimonadetes bacterium KBS708 GN=J421_5155 PE=4
SV=1 ; EVALUE=1e-101 ; Q/S_length_ratio=0.939"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q1IM85|Q1IM85_KORVE ;
ALN/Q_length_ratio=0.589 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_3014 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.630"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|H1XPA3|H1XPA3_9BACT ;
ALN/Q_length_ratio=0.579 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Caldithrix abyssi DSM 13497
GN=Calab_2608 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=1.116"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K1YQU3|K1YQU3_9BACT ;
ALN/Q_length_ratio=0.858 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=uncultured bacterium
GN=ACD_75C00374G0005 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.927"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B4CYF0|B4CYF0_9BACT ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_1688 PE=4 SV=1 ; EVALUE=1e-97 ;
Q/S_length_ratio=0.676"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B8FHB2|B8FHB2_DESAA ;
ALN/Q_length_ratio=0.731 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=Dalk_0493 PE=4 SV=1 ; EVALUE=4e-97 ;
Q/S_length_ratio=1.192"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K1YND1|K1YND1_9BACT ;
ALN/Q_length_ratio=0.668 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=uncultured bacterium
GN=ACD_75C00692G0003 PE=4 SV=1 ; EVALUE=1e-95 ;
Q/S_length_ratio=1.458"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B4DBD7|B4DBD7_9BACT ;
ALN/Q_length_ratio=0.748 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_6228 PE=4 SV=1 ; EVALUE=3e-95 ;
Q/S_length_ratio=0.607"
/note="Pfam_scan:hit_1 (83..151); Pfam:PF13188.1:PAS_8;
Pfam_type:Domain;HMM_aln_Length:46; HMM_Length:64;
EVALUE:9.9e-06; BITSCORE: 25.2"
/note="Pfam_scan:hit_2 (206..319); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:110;
EVALUE:2.5e-14; BITSCORE: 53.2"
/note="Pfam_scan:hit_3 (332..398); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:64; HMM_Length:68;
EVALUE:3.3e-09; BITSCORE: 36.5"
/note="Pfam_scan:hit_4 (439..547);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:111;
EVALUE:2.3e-21; BITSCORE: 75.5"
/note="Pfam_scan:hit_5 (573..681);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:106; HMM_Length:112;
EVALUE:1.2e-17; BITSCORE: 63.9"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MPRRIELSSA PPDPNGPSAF AVAFTGPYSV GVTLGLAVLV PALLVTIALR VRRKLRRPVS
61 PLSDTVPVPP ARPVFTPQPE PDAVFRLLFE HHPAPAWVFD EDSLRFVAVN DAVLRRYGYA
121 RDRFLTLKVR DVCPDEDADR LIGAPCGPLQ WRHRISSGAL IAIEVTSHRI TSDGRLLRLV
181 VASDAIDRRK AEGALKERDD LLHDVLTNVP CAVSWKDRAS IYIGCNDQAA RDHGLTVPGE
241 VIGQTDYDLA RVSEEAESVR ASDLRVIESE EPLLDVEETR TLTDGTKATF LTNRVPLRDS
301 AGRVVGVVGV AQNVTERKRL EDELRHSQKM EAVGRLAGGV AHDFNNLLTI VTGSVHLIRS
361 LPPGDTSLGS YVDEIQGAVD RATALTRQLL AFSRKQPSRP EILDLNEIVT GLASLLRRLL
421 GNRVTIHTDL ATEPVRVRAD RGHLEQILMN LAVNARDAMP NGGTVTIATA PDIANQFARL
481 TVSDTGTGMS DEVKAKIFEP FFTTKEIGKG TGLGLATVHG IVQQAGGGIE VTSTLGTGTT
541 FAIRLPWCST PPPPPSGTLT PLAPLSARPG RSVLLVEDEE RVRKLVRGTL EGWGYAVTEA
601 DRAEEALGLL AVSREFDLLV TDLVMPGMDG RELAARVRAE RPGTAIVFIS GYVPDLKRLD
661 GFSDGVFLPK PFTPFDLLRC AERALRQRKA HDAHAHSAVP VPVPGSPVGA QEL
//