LOCUS VTR96346.1 621 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana succinate dehydrogenase : Succinate
dehydrogenase subunit A OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_1384 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C
protein.
ACCESSION LR593886-5647
PROTEIN_ID VTR96346.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_13680"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|T0LEN5|T0LEN5_9BACT ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Succinate
dehydrogenase flavoprotein subunit OS=candidate division
ZIXI bacterium RBG-1 GN=sdhA PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|X2LCE1|X2LCE1_9BACT ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=Succinate
dehydrogenase flavoprotein subunit OS=uncultured bacterium
lac160 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|X7YHG4|X7YHG4_MYCKA ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Pyridine
nucleotide-disulfide oxidoreductase family protein
OS=Mycobacterium kansasii 662 GN=sdhA PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5MH12|D5MH12_9BACT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Succinate
dehydrogenase flavoprotein subunit OS=Candidatus
Methylomirabilis oxyfera GN=sdhA PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A051UHS2|A0A051UHS2_MYCTX ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Succinate
dehydrogenase [iron-sulfur subunit] SdhA_1
OS=Mycobacterium tuberculosis TKK-01-0051 GN=K875_00691
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|X7Z6E1|X7Z6E1_MYCKA ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Pyridine
nucleotide-disulfide oxidoreductase family protein
OS=Mycobacterium kansasii 732 GN=I546_1244 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|J5EKF0|J5EKF0_9MYCO ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Succinate
dehydrogenase flavoprotein subunit OS=Mycobacterium
colombiense CECT 3035 GN=sdhA PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5B9J4|K5B9J4_9MYCO ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=Pyridine
nucleotide-disulfide oxidoreductase family protein
OS=Mycobacterium hassiacum DSM 44199 GN=C731_0437 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A074RIF8|A0A074RIF8_MYCKA ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Succinate
dehydrogenase OS=Mycobacterium kansasii GN=MKSMC1_03670
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U5WRB1|U5WRB1_MYCKA ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Succinate
dehydrogenase OS=Mycobacterium kansasii ATCC 12478 GN=sdhA
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W0RNA7|W0RNA7_9BACT ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Fumarate
reductase/succinate dehydrogenase flavoprotein domain
protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_4979
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D5PAX9|D5PAX9_9MYCO ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=FAD binding domain
protein OS=Mycobacterium parascrofulaceum ATCC BAA-614
GN=sdhA PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|X7YEP0|X7YEP0_MYCKA ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Pyridine
nucleotide-disulfide oxidoreductase family protein
OS=Mycobacterium kansasii 824 GN=sdhA PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0LW27|A0LW27_ACIC1 ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Succinate
dehydrogenase subunit A OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=Acel_1865 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q1IRW4|Q1IRW4_KORVE ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Succinate
dehydrogenase subunit A OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_1384 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.021"
/note="Pfam_scan:hit_1 (11..428);
Pfam:PF00890.19:FAD_binding_2;
Pfam_type:Family;HMM_aln_Length:416; HMM_Length:417;
EVALUE:6.3e-90; BITSCORE: 301.9"
/note="Pfam_scan:hit_2 (483..606);
Pfam:PF02910.15:Succ_DH_flav_C;
Pfam_type:Domain;HMM_aln_Length:112; HMM_Length:129;
EVALUE:7e-25; BITSCORE: 87.3"
/note="GO_domain:GO:0016491"
BEGIN
1 MSVEFQTHEH DVVVIGAGGA GLRAAIEASA AGVSVGLVCK SLLGKAHTVM AEGGIAAALA
61 NVDNRDNWKV HFADTMRGGQ YVNNWRMAEL HAREAPDRVR ELEKWGAVFD RTPDGKILQR
121 NFGGHKYPRL AHVGDRTGLE LIRTLQDHGI HRGISVYMER TVIRLLKDGD RVAGALAYDR
181 ERGRWTVFRA KAIVLATGGI GKAYKITSNS WEYTGDGHTL AYDAGAELID MEFVQFHPTG
241 MVWPPSVRGI LVTEGVRGEG GVLRNNTGNR FMFGDIPDNY RPQTAKDEEE GFRYVLGDKE
301 ANRPPELLTR DHVARCIVRE VREGRGSPHG GVFLELQTFA EWYGKRAKKF DAAEHWKKKL
361 PSMYHQFKEL GGLDITKEPM EVGPTTHYMM GGVRVDADTQ MSRVPGLFAC GECAAGINGA
421 NRLGGNSLSD LLVLGKRAGE FAAKYAREQS SAGAVPTDQV DAAAKWALEP FDRDVSENPF
481 KVQQDLQDMM QDLVGIVRKE DEMLRALDGL EKLRARAAKV QVTGNREYNP GWHTAMDLHN
541 LLTVSEAVTR AAILRKESRG AQFRDDYPKK DNAKFGKVNS IIAKGTDGTM QIRLEQIPPM
601 PDELKDAIRA EANGVLPDEL K
//