LOCUS VTR96341.1 286 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pseudouridine synthase : RNA pseudouridylate
synthase OS=Pontibacillus litoralis JSM 072002 GN=N784_13800
PE=4 SV=1: PseudoU_synth_2 protein.
ACCESSION LR593886-5642
PROTEIN_ID VTR96341.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_13730"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A0A5G9A6|A0A0A5G9A6_9BACI ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=RNA pseudouridylate
synthase OS=Pontibacillus litoralis JSM 072002
GN=N784_13800 PE=4 SV=1 ; EVALUE=1e-76 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I2GNE0|I2GNE0_9BACT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Pseudouridine
synthase OS=Fibrisoma limi BUZ 3 GN=rluD PE=3 SV=1 ;
EVALUE=6e-76 ; Q/S_length_ratio=0.941"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A098LLW5|A0A098LLW5_9BACT ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Pseudouridine
synthase, RluA family OS=Sporocytophaga myxococcoides
GN=MYP_4714 PE=4 SV=1 ; EVALUE=3e-74 ;
Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I0JSW7|I0JSW7_HALH3 ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Pseudouridine
synthase OS=Halobacillus halophilus (strain ATCC 35676 /
DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) GN=rluD4
PE=3 SV=1 ; EVALUE=4e-74 ; Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A089KF26|A0A089KF26_9BACL ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Pseudouridine
synthase OS=Paenibacillus sp. FSL R7-0273 GN=R70723_06290
PE=4 SV=1 ; EVALUE=1e-73 ; Q/S_length_ratio=0.829"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2QJH0|D2QJH0_SPILD ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Pseudouridine
synthase OS=Spirosoma linguale (strain ATCC 33905 / DSM 74
/ LMG 10896) GN=Slin_2869 PE=3 SV=1 ; EVALUE=8e-72 ;
Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A089KPP8|A0A089KPP8_9BACL ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Pseudouridine
synthase OS=Paenibacillus sp. FSL R7-0331 GN=R70331_06290
PE=4 SV=1 ; EVALUE=1e-71 ; Q/S_length_ratio=0.829"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A0A2T8U9|A0A0A2T8U9_9BACI ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Pseudouridine
synthase OS=Pontibacillus yanchengensis Y32 GN=N782_13335
PE=4 SV=1 ; EVALUE=1e-71 ; Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|H1DCW8|H1DCW8_9PORP ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Pseudouridine
synthase OS=Odoribacter laneus YIT 12061
GN=HMPREF9449_00175 PE=3 SV=1 ; EVALUE=2e-71 ;
Q/S_length_ratio=0.935"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|R5V2C7|R5V2C7_9PORP ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Pseudouridine
synthase OS=Odoribacter laneus CAG:561 GN=BN709_01461 PE=3
SV=1 ; EVALUE=2e-71 ; Q/S_length_ratio=0.935"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A089IWY9|A0A089IWY9_9BACL ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Pseudouridine
synthase OS=Paenibacillus sp. FSL P4-0081 GN=P40081_07670
PE=4 SV=1 ; EVALUE=3e-71 ; Q/S_length_ratio=0.851"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A089JNG4|A0A089JNG4_9BACL ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Pseudouridine
synthase OS=Paenibacillus sp. FSL H7-0737 GN=H70737_06465
PE=4 SV=1 ; EVALUE=4e-71 ; Q/S_length_ratio=0.867"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|W4DBZ6|W4DBZ6_9BACL ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Pseudouridine
synthase OS=Paenibacillus sp. FSL R7-277 GN=C173_19706
PE=3 SV=1 ; EVALUE=4e-71 ; Q/S_length_ratio=0.885"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A0A2HRR9|A0A0A2HRR9_9DELT ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Uncharacterized
protein OS=Desulfobulbus sp. Tol-SR GN=JT06_15490 PE=4
SV=1 ; EVALUE=8e-71 ; Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A089JW96|A0A089JW96_9BACL ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Pseudouridine
synthase OS=Paenibacillus sp. FSL R5-0912 GN=R50912_06855
PE=4 SV=1 ; EVALUE=1e-70 ; Q/S_length_ratio=0.817"
/note="Pfam_scan:hit_1 (82..232);
Pfam:PF00849.17:PseudoU_synth_2;
Pfam_type:Family;HMM_aln_Length:162; HMM_Length:164;
EVALUE:2.7e-32; BITSCORE: 111.8"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:5.4.99.12"
BEGIN
1 MQHLPSPASE VPLLEWLLHA LAPMNRTRVK QVLRSGRVAV NGTLITQHDH PVRPGDQITI
61 ARDAPTPATD LAGITIVHED AHLIVIDKPS GLLTVATESE KTDTAFVRLS AHLAARNAGR
121 PFVVHRLDRD TSGLLLFARS AEVRDQLQAD WEDVTKTYLA VVEGAPTPAR GTIENFLTEG
181 RDLRVRAGRT PGKDAKRAVT RYQMREARGR YVLVEVELET GRKHQIRVHM AGVGCPVAGD
241 KMYGATTDPA RRLCLHAWRL AFDHPFSGTR VEAESPFPAA LARVVG
//