LOCUS VTR96299.1 302 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana diguanylate cyclase : Diguanylate cyclase
(GGDEF) domain-containing protein OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6650 PE=4 SV=1: FHA: GGDEF protein.
ACCESSION LR593886-5600
PROTEIN_ID VTR96299.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_14150"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DPI0|L0DPI0_SINAD ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Diguanylate cyclase
(GGDEF) domain-containing protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_6650 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A017SZB5|A0A017SZB5_9DELT ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=GGDEF family
protein OS=Chondromyces apiculatus DSM 436 GN=CAP_7268
PE=4 SV=1 ; EVALUE=7e-91 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A9FZW1|A9FZW1_SORC5 ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=FHA domain protein
OS=Sorangium cellulosum (strain So ce56) GN=sce8626 PE=4
SV=1 ; EVALUE=3e-90 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|S4XIE2|S4XIE2_SORCE ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Diguanylate cyclase
OS=Sorangium cellulosum So0157-2 GN=SCE1572_46560 PE=4
SV=1 ; EVALUE=7e-90 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L7U8F2|L7U8F2_MYXSD ;
ALN/Q_length_ratio=0.897 ; DESCRIPTION=FHA domain/GGDEF
domain-containing protein OS=Myxococcus stipitatus (strain
DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_03895 PE=4 SV=1 ;
EVALUE=1e-86 ; Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q08Z79|Q08Z79_STIAD ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=FHA domain/GGDEF
domain protein OS=Stigmatella aurantiaca (strain DW4/3-1)
GN=STAUR_4495 PE=4 SV=1 ; EVALUE=4e-86 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A085WSG8|A0A085WSG8_9DELT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=FHA domain/GGDEF
domain protein OS=Hyalangium minutum GN=DB31_5673 PE=4
SV=1 ; EVALUE=6e-86 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A085XAQ4|A0A085XAQ4_9DELT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=FHA domain/GGDEF
domain protein OS=Enhygromyxa salina GN=DB30_4465 PE=4
SV=1 ; EVALUE=6e-86 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U2U3Q6|U2U3Q6_9DELT ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=FHA domain/GGDEF
domain protein OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_00502 PE=4 SV=1 ; EVALUE=2e-84 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q1D565|Q1D565_MYXXD ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=FHA domain/GGDEF
domain protein OS=Myxococcus xanthus (strain DK 1622)
GN=MXAN_4029 PE=4 SV=1 ; EVALUE=3e-84 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F8CHP0|F8CHP0_MYXFH ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=FHA domain/GGDEF
domain-containing protein OS=Myxococcus fulvus (strain
ATCC BAA-855 / HW-1) GN=LILAB_28270 PE=4 SV=1 ;
EVALUE=6e-84 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|D0LH44|D0LH44_HALO1 ;
ALN/Q_length_ratio=0.901 ; DESCRIPTION=Diguanylate cyclase
OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 /
SMP-2) GN=Hoch_5712 PE=4 SV=1 ; EVALUE=9e-84 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H8MSM8|H8MSM8_CORCM ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=FHA domain/GGDEF
domain-containing protein OS=Corallococcus coralloides
(strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) GN=cph2
PE=4 SV=1 ; EVALUE=1e-83 ; Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S9Q8K8|S9Q8K8_9DELT ;
ALN/Q_length_ratio=0.897 ; DESCRIPTION=FHA domain/GGDEF
domain protein OS=Cystobacter fuscus DSM 2262
GN=D187_004788 PE=4 SV=1 ; EVALUE=4e-81 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D0LHJ8|D0LHJ8_HALO1 ;
ALN/Q_length_ratio=0.897 ; DESCRIPTION=Diguanylate cyclase
OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 /
SMP-2) GN=Hoch_0219 PE=4 SV=1 ; EVALUE=2e-80 ;
Q/S_length_ratio=0.997"
/note="Pfam_scan:hit_1 (53..117); Pfam:PF00498.21:FHA;
Pfam_type:Family;HMM_aln_Length:66; HMM_Length:68;
EVALUE:1.7e-16; BITSCORE: 60.0"
/note="Pfam_scan:hit_2 (141..299); Pfam:PF00990.16:GGDEF;
Pfam_type:Domain;HMM_aln_Length:158; HMM_Length:161;
EVALUE:9.5e-46; BITSCORE: 155.3"
/note="GO_domain:GO:0003674"
BEGIN
1 MSSSGRIIAE KVTETWVSAP KKLFTAKREA CLVHIYPTGP TMGCRYPLTD RPLVLGRGED
61 SDIRLTDHSV SRRHALIEPA TDGYHVSDQN STNGTFVNDK QLDTARLLKD GDYLRVGNCL
121 YRYLAGGNIE AEYHEEIYRL TILDGLTQIH NQRYLDEFLD REVVRSQRHH RPLSVLAIDI
181 DKFKTINDNL GHLCGDFVLR ELAGVVRGIV RQEDLFARSG GEEFVVVLVE TTLDGALQVA
241 ERIREAVAEH QFRFETTPVN LTVSIGLAVT MGDDNATAID LRQTADQKLY EAKRTGRNRV
301 CS
//