LOCUS VTR96230.1 291 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana family transcriptional regulator :
Putative AraC family transcriptional regulator OS=Pseudomonas
alcaligenes NBRC 14159 GN=PA6_030_00030 PE=4 SV=1: AraC_binding:
HTH_18 protein.
ACCESSION LR593886-5531
PROTEIN_ID VTR96230.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_14840"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|U2ZR26|U2ZR26_PSEAC ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Putative AraC
family transcriptional regulator OS=Pseudomonas
alcaligenes NBRC 14159 GN=PA6_030_00030 PE=4 SV=1 ;
EVALUE=3e-57 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5X6P7|D5X6P7_THIK1 ;
ALN/Q_length_ratio=0.897 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Thiomonas intermedia (strain
K12) GN=Tint_2703 PE=4 SV=1 ; EVALUE=4e-57 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A078BH44|A0A078BH44_9BURK ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Thiomonas sp. CB2
GN=THICB2_440013 PE=4 SV=1 ; EVALUE=6e-57 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D6CMR4|D6CMR4_THIA3 ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=Putative
Transcriptional Regulator, AraC family OS=Thiomonas
arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As)
GN=THI_3245 PE=4 SV=1 ; EVALUE=1e-56 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|S6BD88|S6BD88_PSERE ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Putative AraC
family transcriptional regulator OS=Pseudomonas
resinovorans NBRC 106553 GN=PCA10_12520 PE=4 SV=1 ;
EVALUE=3e-55 ; Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|U3H843|U3H843_PSEAC ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas alcaligenes OT 69 GN=L682_22615
PE=4 SV=1 ; EVALUE=3e-55 ; Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9U5Z4|K9U5Z4_9CYAN ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Chroococcidiopsis thermalis PCC
7203 GN=Chro_5155 PE=4 SV=1 ; EVALUE=8e-55 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D6TVD7|D6TVD7_9CHLR ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Ktedonobacter racemifer DSM
44963 GN=Krac_5261 PE=4 SV=1 ; EVALUE=2e-54 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U9VVG0|U9VVG0_9CYAN ;
ALN/Q_length_ratio=0.935 ; DESCRIPTION=Family
transcriptional regulator OS=Leptolyngbya sp. Heron Island
J GN=N836_15245 PE=4 SV=1 ; EVALUE=1e-53 ;
Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A4XXL4|A4XXL4_PSEMY ;
ALN/Q_length_ratio=0.887 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Pseudomonas mendocina (strain
ymp) GN=Pmen_3327 PE=4 SV=1 ; EVALUE=2e-53 ;
Q/S_length_ratio=1.043"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|J7UGM6|J7UGM6_PSEME ;
ALN/Q_length_ratio=0.887 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas mendocina DLHK
GN=A471_17018 PE=4 SV=1 ; EVALUE=2e-53 ;
Q/S_length_ratio=1.043"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A024HLH3|A0A024HLH3_PSESB ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Putative
transcriptional regulator OS=Pseudomonas knackmussii B13
GN=PKB_4153 PE=4 SV=1 ; EVALUE=6e-53 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q1I8A2|Q1I8A2_PSEE4 ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Putative
transcriptional regulator, AraC family OS=Pseudomonas
entomophila (strain L48) GN=PSEEN3375 PE=4 SV=1 ;
EVALUE=3e-52 ; Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K9FSD3|K9FSD3_9CYAN ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=DNA-binding
domain-containing protein, AraC-type OS=Leptolyngbya sp.
PCC 7375 GN=Lepto7375DRAFT_6273 PE=4 SV=1 ; EVALUE=4e-52 ;
Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S2JZG6|S2JZG6_9PSED ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas plecoglossicida
NB2011 GN=L321_13741 PE=4 SV=1 ; EVALUE=4e-52 ;
Q/S_length_ratio=1.051"
/note="Pfam_scan:hit_1 (24..161);
Pfam:PF02311.14:AraC_binding;
Pfam_type:Domain;HMM_aln_Length:127; HMM_Length:136;
EVALUE:2.5e-20; BITSCORE: 72.5"
/note="Pfam_scan:hit_2 (202..280); Pfam:PF12833.2:HTH_18;
Pfam_type:Domain;HMM_aln_Length:79; HMM_Length:81;
EVALUE:2.3e-22; BITSCORE: 78.8"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 METIVPQRPS APADVTSMGR SDASGGLDLM LAIHRTHTFP RHFHETYVVQ VVESGVDRFY
61 CRGALHEAGA GSVVCLNPGE VHTGGPAHGQ VLRYRSFYLQ TRYLAEVASD LGGSGQRAPE
121 FHHCVISDPA LTGRLAQIHA AIQPPTPRIE AEERLLDGAA SLLAAVGYGR RVGALRREDG
181 AVRVACEYLR ANVSGQPSLD DLAAQTRLSR FHLLRVFRRA TGLPPHQYLL NLRIEQARVL
241 LRRGVPPAQV AASVGFADQS HLNRYFKRHI GITPGRYAQS NIVQDRVPAS Q
//