LOCUS VTR96207.1 182 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna polymerase sigma-70 ecf-like protein
: RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula
sallentina SM41 GN=RSSM_01735 PE=4 SV=1: Sigma70_ECF protein.
ACCESSION LR593886-5508
PROTEIN_ID VTR96207.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_15070"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5U5R1|M5U5R1_9PLAN ;
ALN/Q_length_ratio=1.011 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula sallentina
SM41 GN=RSSM_01735 PE=4 SV=1 ; EVALUE=2e-61 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SG46|F0SG46_PLABD ;
ALN/Q_length_ratio=1.011 ; DESCRIPTION=RNA polymerase,
sigma subunit, ECF family OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_0708 PE=4 SV=1 ; EVALUE=2e-57 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DL66|L0DL66_SINAD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA polymerase
sigma factor, TIGR02999 family OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5446 PE=4 SV=1 ; EVALUE=4e-57 ;
Q/S_length_ratio=0.919"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5RVM0|M5RVM0_9PLAN ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula maiorica SM1
GN=RMSM_03630 PE=4 SV=1 ; EVALUE=5e-57 ;
Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TFP7|M5TFP7_9PLAN ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula sp. SWK7
GN=RRSWK_04777 PE=4 SV=1 ; EVALUE=5e-56 ;
Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F2APD4|F2APD4_RHOBT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase
ECF-type sigma factor OS=Rhodopirellula baltica WH47
GN=RBWH47_03818 PE=4 SV=1 ; EVALUE=7e-55 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K5DF17|K5DF17_RHOBT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula baltica SH28
GN=RBSH_03328 PE=4 SV=1 ; EVALUE=7e-55 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CKS4|L7CKS4_RHOBT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula baltica SWK14
GN=RBSWK_01172 PE=4 SV=1 ; EVALUE=7e-55 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q7UYG8|Q7UYG8_RHOBA ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB621 PE=4 SV=1 ; EVALUE=8e-55 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2AYB5|M2AYB5_9PLAN ;
ALN/Q_length_ratio=1.005 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula europaea 6C
GN=RE6C_01564 PE=4 SV=1 ; EVALUE=1e-54 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5S6A5|M5S6A5_9PLAN ;
ALN/Q_length_ratio=1.005 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula europaea SH398
GN=RESH_02334 PE=4 SV=1 ; EVALUE=2e-54 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A3ZY80|A3ZY80_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_26749 PE=4 SV=1 ; EVALUE=3e-54 ;
Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5S8T7|M5S8T7_9PLAN ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula europaea SH398
GN=RESH_01589 PE=4 SV=1 ; EVALUE=4e-54 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0DFV0|L0DFV0_SINAD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA polymerase
sigma factor, TIGR02999 family OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_4026 PE=4 SV=1 ; EVALUE=6e-54 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5TXQ0|M5TXQ0_9PLAN ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase
sigma-70 ECF-like protein OS=Rhodopirellula sallentina
SM41 GN=RSSM_04606 PE=4 SV=1 ; EVALUE=4e-53 ;
Q/S_length_ratio=0.958"
/note="Pfam_scan:hit_1 (1..180);
Pfam:PF07638.6:Sigma70_ECF;
Pfam_type:Family;HMM_aln_Length:181; HMM_Length:185;
EVALUE:2e-56; BITSCORE: 190.6"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MFEITRLLNA VRVGDRKAAA DLLPLVYDEL RKLAAVRIAQ EPSGHTLHAT ELVHEAYLRL
61 VGEQQFDGRG HFFAAAAEAM RRILVDHART KHAEKRGSKW NRVELADWHN VAQPPEQILA
121 INDALDRLAA TEPDKAKLVT MRFFGGATMP EAADALGVSL RTAERWWLFA RSWLYTELLE
181 AN
//