LOCUS VTR96134.1 401 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana site-specific recombinase : Uncharacterized
protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_10342
PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-5435
PROTEIN_ID VTR96134.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_15800"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZM09|A3ZM09_9PLAN ;
ALN/Q_length_ratio=0.751 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_10342 PE=4 SV=1 ; EVALUE=9e-96 ;
Q/S_length_ratio=1.204"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5T5X3|M5T5X3_9PLAN ;
ALN/Q_length_ratio=0.828 ; DESCRIPTION=Integrase family
protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_03018 PE=4
SV=1 ; EVALUE=5e-71 ; Q/S_length_ratio=1.179"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K5D6I0|K5D6I0_RHOBT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Tyrosine
recombinase XerC OS=Rhodopirellula baltica SH28
GN=RBSH_02353 PE=4 SV=1 ; EVALUE=5e-70 ;
Q/S_length_ratio=1.108"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5UBZ8|M5UBZ8_9PLAN ;
ALN/Q_length_ratio=0.918 ;
DESCRIPTION=Integrase/recombinase OS=Rhodopirellula
sallentina SM41 GN=RSSM_05035 PE=4 SV=1 ; EVALUE=2e-67 ;
Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2R3A0|D2R3A0_PIRSD ;
ALN/Q_length_ratio=0.524 ; DESCRIPTION=Uncharacterized
protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=Psta_0443 PE=4 SV=1 ; EVALUE=8e-08 ;
Q/S_length_ratio=0.807"
/note="Pfam_scan:hit_1 (195..379);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:148; HMM_Length:173;
EVALUE:1.4e-10; BITSCORE: 41.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MSEGNSTAPG PDGKPNKPHP DFPLFPHATK RWAKKIRGKM HYFGPWDDPD GALKKYHAQK
61 EALHAGRKPR EVSEGVTIKD LCNAFLNHKK ALLDAGDIAA RTWLNYVETT KMVVEQFGKN
121 RLAVDVSQDD FAKLRTVMSK KWGPVRVRNF IQQTRSVFKY GYDSELLAAP LRFGPGFARP
181 TKKTLRLERA KKGPRMFEAA EVRALINGAE VQKKDGPRLV RPTTSMKAMI LLGVNCGFGN
241 ADCGTLPRSA LDLEGGWVNY HRPKTGITRR CPLWPETIES LRAVLADRRE PRDPADSDLV
301 FITAIGLSWH KETGDNPISK EMRKFLNVLE LDGHRNFYAL RHTFETIGGE AKDQVAVDHI
361 MGHARDDMAS VYRERISDER LKAVSDFVRK WGFGAALAAS E
//