LOCUS VTR96117.1 239 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana PadR family transcriptional regulator
OS=Rhodomicrobium udaipurense JA643 GN=T281_14390 PE=4
SV=1: PadR protein.
ACCESSION LR593886-5418
PROTEIN_ID VTR96117.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_15970"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A037UTJ8|A0A037UTJ8_9RHIZ ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=PadR family
transcriptional regulator OS=Rhodomicrobium udaipurense
JA643 GN=T281_14390 PE=4 SV=1 ; EVALUE=3e-72 ;
Q/S_length_ratio=1.072"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E3I6B5|E3I6B5_RHOVT ;
ALN/Q_length_ratio=0.623 ; DESCRIPTION=Transcriptional
regulator, PadR-like family OS=Rhodomicrobium vannielii
(strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)
GN=Rvan_0186 PE=4 SV=1 ; EVALUE=8e-67 ;
Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B8EKR3|B8EKR3_METSB ;
ALN/Q_length_ratio=0.623 ; DESCRIPTION=Transcriptional
regulator, PadR-like family OS=Methylocella silvestris
(strain BL2 / DSM 15510 / NCIMB 13906) GN=Msil_3031 PE=4
SV=1 ; EVALUE=3e-45 ; Q/S_length_ratio=1.593"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|G2TDH0|G2TDH0_RHORU ;
ALN/Q_length_ratio=0.636 ; DESCRIPTION=PadR family
transcriptional regulator OS=Rhodospirillum rubrum F11
GN=F11_17630 PE=4 SV=1 ; EVALUE=3e-41 ;
Q/S_length_ratio=1.172"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q2RNR0|Q2RNR0_RHORT ;
ALN/Q_length_ratio=0.636 ; DESCRIPTION=Transcriptional
regulator, PadR family OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=Rru_A3441 PE=4 SV=1 ;
EVALUE=3e-41 ; Q/S_length_ratio=1.172"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B0T548|B0T548_CAUSK ;
ALN/Q_length_ratio=0.778 ; DESCRIPTION=Transcriptional
regulator, PadR-like family OS=Caulobacter sp. (strain
K31) GN=Caul_4874 PE=4 SV=1 ; EVALUE=3e-39 ;
Q/S_length_ratio=1.265"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G0AJ37|G0AJ37_COLFT ;
ALN/Q_length_ratio=0.615 ; DESCRIPTION=Transcriptional
Regulator, PadR-like family OS=Collimonas fungivorans
(strain Ter331) GN=yqjI PE=4 SV=1 ; EVALUE=6e-38 ;
Q/S_length_ratio=1.265"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B2IIF7|B2IIF7_BEII9 ;
ALN/Q_length_ratio=0.632 ; DESCRIPTION=Transcriptional
regulator, PadR-like family OS=Beijerinckia indica subsp.
indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)
GN=Bind_2503 PE=4 SV=1 ; EVALUE=1e-37 ;
Q/S_length_ratio=1.572"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|J2UQX5|J2UQX5_9BURK ;
ALN/Q_length_ratio=0.628 ; DESCRIPTION=Putative
transcriptional regulator OS=Herbaspirillum sp. CF444
GN=PMI16_00512 PE=4 SV=1 ; EVALUE=4e-37 ;
Q/S_length_ratio=1.238"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q9A275|Q9A275_CAUCR ;
ALN/Q_length_ratio=0.623 ; DESCRIPTION=Uncharacterized
protein OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=CC_3691 PE=4 SV=1 ; EVALUE=8e-35 ;
Q/S_length_ratio=1.572"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A095ARH3|A0A095ARH3_9SPHN ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Transcriptional
regulator PadR-like family protein OS=Sphingopyxis sp.
LC81 GN=FG91_02867 PE=4 SV=1 ; EVALUE=2e-34 ;
Q/S_length_ratio=1.213"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A095ASI8|A0A095ASI8_9SPHN ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=PadR-like family
transcriptional regulator OS=Sphingopyxis sp. LC363
GN=FG95_03532 PE=4 SV=1 ; EVALUE=2e-34 ;
Q/S_length_ratio=1.189"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A0A1FDL8|A0A0A1FDL8_9BURK ;
ALN/Q_length_ratio=0.615 ; DESCRIPTION=Transcriptional
regulator OS=Collimonas arenae GN=LT85_3670 PE=4 SV=1 ;
EVALUE=5e-34 ; Q/S_length_ratio=1.265"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B8GVW7|B8GVW7_CAUCN ;
ALN/Q_length_ratio=0.791 ; DESCRIPTION=PadR-family
transcriptional regulator OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=CCNA_03805 PE=4 SV=1 ;
EVALUE=6e-34 ; Q/S_length_ratio=1.245"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A089PWB7|A0A089PWB7_9ENTR ;
ALN/Q_length_ratio=0.661 ; DESCRIPTION=Transcriptional
regulator OS=Cedecea neteri GN=JT31_00835 PE=4 SV=1 ;
EVALUE=6e-34 ; Q/S_length_ratio=1.398"
/note="Pfam_scan:hit_1 (101..170); Pfam:PF03551.9:PadR;
Pfam_type:Family;HMM_aln_Length:72; HMM_Length:75;
EVALUE:7.3e-19; BITSCORE: 67.3"
BEGIN
1 MFGGYFKHGR GGDPRGTAEM VNRAHFCRGR GGRHFGHGEY RYEPDEGAEF TPFEDGGDEM
61 GRHGHHGGRG RDGWGFGWNG GHRGRGPAGR PLEQGDLRWL TLDLIAAQPR HGYEIIKAIA
121 DALSGHYAPS PGVIYPTLTL LEETGLIASE AQGPKKLYRL TDEGRAEVES HAADIQAAKA
181 RLAEANTRFG GAPAPELMRA MGNLRAALQV RLGKGPLTTE ALNAITAALD RAAGEIERS
//