LOCUS VTR96071.1 239 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna glycosylase : TDG/mug DNA glycosylase
family protein OS=Amycolatopsis methanolica 239 GN=mug
PE=4 SV=1: UDG protein.
ACCESSION LR593886-5372
PROTEIN_ID VTR96071.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_16430"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A076N2G1|A0A076N2G1_AMYME ;
ALN/Q_length_ratio=0.736 ; DESCRIPTION=TDG/mug DNA
glycosylase family protein OS=Amycolatopsis methanolica
239 GN=mug PE=4 SV=1 ; EVALUE=9e-78 ;
Q/S_length_ratio=1.299"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A034UG28|A0A034UG28_9NOCA ;
ALN/Q_length_ratio=0.782 ; DESCRIPTION=G/U
mismatch-specific DNA glycosylase OS=Nocardia brasiliensis
NBRC 14402 GN=mug PE=4 SV=1 ; EVALUE=5e-76 ;
Q/S_length_ratio=1.195"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K0EZZ0|K0EZZ0_9NOCA ;
ALN/Q_length_ratio=0.732 ; DESCRIPTION=DNA glycosylase
OS=Nocardia brasiliensis ATCC 700358 GN=O3I_023520 PE=4
SV=1 ; EVALUE=1e-75 ; Q/S_length_ratio=1.292"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|R1IHW5|R1IHW5_9PSEU ;
ALN/Q_length_ratio=0.728 ; DESCRIPTION=TDG/mug DNA
glycosylase family protein OS=Amycolatopsis vancoresmycina
DSM 44592 GN=H480_03341 PE=4 SV=1 ; EVALUE=9e-74 ;
Q/S_length_ratio=1.285"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K9U8A8|K9U8A8_9CYAN ;
ALN/Q_length_ratio=0.724 ; DESCRIPTION=G/U
mismatch-specific uracil-DNA glycosylase
OS=Chroococcidiopsis thermalis PCC 7203 GN=Chro_5488 PE=4
SV=1 ; EVALUE=8e-73 ; Q/S_length_ratio=1.306"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|W0RFI8|W0RFI8_9BACT ;
ALN/Q_length_ratio=0.703 ; DESCRIPTION=Uracil-DNA
glycosylase superfamily OS=Gemmatimonadetes bacterium
KBS708 GN=J421_1568 PE=4 SV=1 ; EVALUE=2e-72 ;
Q/S_length_ratio=1.245"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9END2|K9END2_9CYAN ;
ALN/Q_length_ratio=0.757 ; DESCRIPTION=G:T/U
mismatch-specific DNA glycosylase OS=Leptolyngbya sp. PCC
7375 GN=Lepto7375DRAFT_6664 PE=4 SV=1 ; EVALUE=3e-72 ;
Q/S_length_ratio=1.172"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W5TK12|W5TK12_9NOCA ;
ALN/Q_length_ratio=0.753 ; DESCRIPTION=Putative G/U
mismatch-specific DNA glycosylase OS=Nocardia nova SH22a
GN=NONO_c47150 PE=4 SV=1 ; EVALUE=7e-72 ;
Q/S_length_ratio=1.278"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U9W209|U9W209_9CYAN ;
ALN/Q_length_ratio=0.762 ; DESCRIPTION=Dna glycosylase
OS=Leptolyngbya sp. Heron Island J GN=N836_05600 PE=4 SV=1
; EVALUE=8e-72 ; Q/S_length_ratio=1.177"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A084SJF7|A0A084SJF7_9DELT ;
ALN/Q_length_ratio=0.669 ; DESCRIPTION=DNA glycosylase
OS=Cystobacter violaceus Cb vi76 GN=Q664_40240 PE=4 SV=1 ;
EVALUE=9e-72 ; Q/S_length_ratio=1.423"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|H8MFG6|H8MFG6_CORCM ;
ALN/Q_length_ratio=0.728 ; DESCRIPTION=G/U
mismatch-specific DNA glycosylase OS=Corallococcus
coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 /
M2) GN=mug PE=4 SV=1 ; EVALUE=1e-71 ;
Q/S_length_ratio=1.299"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7U5E3|L7U5E3_MYXSD ;
ALN/Q_length_ratio=0.724 ; DESCRIPTION=G/U
mismatch-specific DNA glycosylase OS=Myxococcus stipitatus
(strain DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_02760 PE=4
SV=1 ; EVALUE=4e-71 ; Q/S_length_ratio=1.292"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L8P628|L8P628_STRVR ;
ALN/Q_length_ratio=0.741 ; DESCRIPTION=Putative G/U
mismatch-specific DNA glycosylase OS=Streptomyces
viridochromogenes Tue57 GN=STVIR_7460 PE=4 SV=1 ;
EVALUE=4e-71 ; Q/S_length_ratio=1.265"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A014NYB8|A0A014NYB8_9ACTO ;
ALN/Q_length_ratio=0.745 ; DESCRIPTION=DNA glycosylase
OS=Streptomyces sp. PRh5 GN=Z951_34160 PE=4 SV=1 ;
EVALUE=6e-71 ; Q/S_length_ratio=1.299"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S4MWA8|S4MWA8_9ACTO ;
ALN/Q_length_ratio=0.745 ; DESCRIPTION=Putative G/U
mismatch-specific DNA glycosylase OS=Streptomyces
afghaniensis 772 GN=STAFG_1751 PE=4 SV=1 ; EVALUE=6e-71 ;
Q/S_length_ratio=1.320"
/note="Pfam_scan:hit_1 (78..236); Pfam:PF03167.14:UDG;
Pfam_type:Domain;HMM_aln_Length:148; HMM_Length:152;
EVALUE:2e-21; BITSCORE: 76.0"
/note="GO_domain:GO:0016798"
BEGIN
1 MKQGCRLFDE GTPEQILASE LVSASARRDA ESASEEYNGL IRTPAPEQPG RHPTGPDVPP
61 APRPTPAQLR AAQNKTVPDV IAPGLSVLFC GINPGLYTAA IGHHFGRPGN RFWPTLHAAR
121 FTPRLLDPSE ELELLPLGYG ITNVVARATV GADELTNKEI IAGGAILAAK VRDFAPRYLA
181 VLGIGAYRTA FAKPKATVGL QPDAIGETRV WVLPNPSGLN AHYQGKDLVK VFRQLRDTA
//