LOCUS VTR95974.1 532 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana ribonuclease : Ribonuclease Y OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008
/ 290) GN=rny PE=3 SV=1: DUF3552: KH_1: HD protein.
ACCESSION LR593886-5275
PROTEIN_ID VTR95974.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_17400"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DD40|L0DD40_SINAD ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Ribonuclease Y
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=rny PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SM61|F0SM61_PLABD ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Ribonuclease Y
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=rny PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2R224|D2R224_PIRSD ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Ribonuclease Y
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=rny PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6C2F7|A6C2F7_9PLAN ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Ribonuclease Y
OS=Planctomyces maris DSM 8797 GN=rny PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SYR3|D5SYR3_PLAL2 ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Ribonuclease Y
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=rny PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZPY8|A3ZPY8_9PLAN ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Ribonuclease Y
OS=Blastopirellula marina DSM 3645 GN=rny PE=3 SV=1 ;
EVALUE=1e-179 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_7 ; ACCESSION=B2A3V6 ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Ribonuclease Y
OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM
18059 / JW/NM-WN-LF) GN=rny PE=3 SV=1 ; EVALUE=1e-165 ;
Q/S_length_ratio=1.092"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|I3IJW2|I3IJW2_9PLAN ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Ribonuclease Y
OS=planctomycete KSU-1 GN=rny PE=3 SV=1 ; EVALUE=1e-164 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5RQ04|M5RQ04_9PLAN ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=Ribonuclease Y
OS=Rhodopirellula maiorica SM1 GN=rny PE=3 SV=1 ;
EVALUE=1e-163 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q1PVG9|Q1PVG9_9BACT ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Ribonuclease Y
OS=Candidatus Kuenenia stuttgartiensis GN=rny PE=3 SV=1 ;
EVALUE=1e-162 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A099A2U6|A0A099A2U6_CLOTA ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Ribonuclease Y
OS=Clostridium tetani GN=rny PE=3 SV=1 ; EVALUE=1e-160 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D6Z242|D6Z242_DESAT ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Ribonuclease Y
OS=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM
U267 / AHT2) GN=rny PE=3 SV=1 ; EVALUE=1e-160 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A099A806|A0A099A806_CLOTA ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Ribonuclease Y
OS=Clostridium tetani ATCC 9441 GN=rny PE=3 SV=1 ;
EVALUE=1e-160 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K5EBM9|K5EBM9_RHOBT ;
ALN/Q_length_ratio=0.914 ; DESCRIPTION=Ribonuclease Y
OS=Rhodopirellula baltica SH28 GN=rny PE=3 SV=1 ;
EVALUE=1e-159 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K8E121|K8E121_9FIRM ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Ribonuclease Y
OS=Desulfotomaculum hydrothermale Lam5 = DSM 18033 GN=rny
PE=3 SV=1 ; EVALUE=1e-159 ; Q/S_length_ratio=1.037"
/note="Pfam_scan:hit_1 (9..216); Pfam:PF12072.3:DUF3552;
Pfam_type:Family;HMM_aln_Length:171; HMM_Length:201;
EVALUE:5.1e-38; BITSCORE: 130.3"
/note="Pfam_scan:hit_2 (222..281); Pfam:PF00013.24:KH_1;
Pfam_type:Domain;HMM_aln_Length:53; HMM_Length:60;
EVALUE:4.4e-09; BITSCORE: 35.8"
/note="Pfam_scan:hit_3 (347..461); Pfam:PF01966.17:HD;
Pfam_type:Family;HMM_aln_Length:119; HMM_Length:122;
EVALUE:3.7e-16; BITSCORE: 59.2"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0034655"
/note="GO_domain:GO:0005575"
BEGIN
1 MEPLLIGGLV VVAALMGIGG TYLVVRRSPP VTVREPAPPD PEVMRRAEAR GEELVEQSRR
61 DAERIVREAE LKARDEAVRR REELSRELDT ARSEVRDLER RVEKREDAVE QHQRELVRKE
121 KYVDGLKEKI AEREDALDKK AHHLDGLIDK QTKQLHELSG LSREDAQKLL LERLERELSD
181 EIAKKIRQHD ERMKQQAEAT AREIVTIAIQ RYAAHQTAGA TVSTVDIPSD DMKGRIIGRE
241 GRNIRTFEKL TGVDVIVDDT PGVVIVSAFD NVRRETARIA LTKLIQDGRI HPTRIEEVVA
301 ETQAEMEKHI QELGTQAVLD ADVQMPHEKL VYLLGRLRFR TSYSQNVLAH SVEVAHLCGI
361 MASELGLSPA IARRCGLLHD VGKAADHEME GGHPKVGAEL AKRYGETSKE VLHAIAGHHD
421 DITIDNIYTV LVASADAISA SRPGARRETL EKYVKRLADL EAVACGFPEV DQAFAIQAGR
481 ELRVIANAQR TNDADAVRIC RDIARSIEQQ LDYPGEIKVT VIRESRATDT AK
//