LOCUS VTR95954.1 337 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna polymerase iii subunit delta :
DNA polymerase III, delta'' subunit OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_4806 PE=4 SV=1: DNA_pol3_delta2 protein.
ACCESSION LR593886-5255
PROTEIN_ID VTR95954.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_17600"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DHW6|L0DHW6_SINAD ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=DNA polymerase III,
delta'' subunit OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4806
PE=4 SV=1 ; EVALUE=6e-78 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8R2Z2|E8R2Z2_ISOPI ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=DNA polymerase III,
delta prime subunit OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_0907 PE=4 SV=1 ;
EVALUE=2e-72 ; Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A3ZYH4|A3ZYH4_9PLAN ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=DNA polymerase III,
tau/gamma subunit OS=Blastopirellula marina DSM 3645
GN=DSM3645_07026 PE=4 SV=1 ; EVALUE=8e-67 ;
Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5SVB5|D5SVB5_PLAL2 ;
ALN/Q_length_ratio=1.042 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=Plim_1351 PE=4 SV=1 ;
EVALUE=4e-58 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2R1Q1|D2R1Q1_PIRSD ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=DNA polymerase III
gamma/tau subunits-like protein OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2096
PE=4 SV=1 ; EVALUE=3e-53 ; Q/S_length_ratio=0.913"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F0ST49|F0ST49_PLABD ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA polymerase III,
delta prime subunit OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=Plabr_1649 PE=4 SV=1 ; EVALUE=3e-48 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6BZZ4|A6BZZ4_9PLAN ;
ALN/Q_length_ratio=1.009 ; DESCRIPTION=DNA polymerase III,
tau/gamma subunit OS=Planctomyces maris DSM 8797
GN=PM8797T_22198 PE=4 SV=1 ; EVALUE=3e-46 ;
Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|I3IJW0|I3IJW0_9PLAN ;
ALN/Q_length_ratio=0.656 ; DESCRIPTION=DNA polymerase III
delta' subunit OS=planctomycete KSU-1 GN=KSU1_C0409 PE=4
SV=1 ; EVALUE=2e-41 ; Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q1PVI5|Q1PVI5_9BACT ;
ALN/Q_length_ratio=0.602 ; DESCRIPTION=Similar to DNA
polymerase III clamp loader small subunit OS=Candidatus
Kuenenia stuttgartiensis GN=kustc0488 PE=4 SV=1 ;
EVALUE=6e-41 ; Q/S_length_ratio=0.952"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A1APK8|A1APK8_PELPD ;
ALN/Q_length_ratio=0.617 ; DESCRIPTION=DNA polymerase III,
delta prime subunit OS=Pelobacter propionicus (strain DSM
2379) GN=Ppro_1664 PE=4 SV=1 ; EVALUE=9e-41 ;
Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|B3E2K6|B3E2K6_GEOLS ;
ALN/Q_length_ratio=0.662 ; DESCRIPTION=DNA polymerase III,
delta prime subunit OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=Glov_1947 PE=4 SV=1 ;
EVALUE=9e-41 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E4RPD3|E4RPD3_HALHG ;
ALN/Q_length_ratio=0.659 ; DESCRIPTION=DNA polymerase III,
delta prime subunit OS=Halanaerobium hydrogeniformans
GN=Halsa_0343 PE=4 SV=1 ; EVALUE=2e-39 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5DMY0|K5DMY0_RHOBT ;
ALN/Q_length_ratio=0.852 ; DESCRIPTION=DNA polymerase III,
tau/gamma subunit OS=Rhodopirellula baltica SH28
GN=RBSH_00942 PE=4 SV=1 ; EVALUE=7e-39 ;
Q/S_length_ratio=0.896"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7UK75|Q7UK75_RHOBA ;
ALN/Q_length_ratio=0.852 ; DESCRIPTION=DNA polymerase III,
tau/gamma subunit OS=Rhodopirellula baltica (strain SH1)
GN=holB PE=4 SV=1 ; EVALUE=1e-38 ; Q/S_length_ratio=0.896"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0L8T4|A0L8T4_MAGSM ;
ALN/Q_length_ratio=0.685 ; DESCRIPTION=DNA polymerase III,
delta prime subunit OS=Magnetococcus sp. (strain MC-1)
GN=Mmc1_1869 PE=4 SV=1 ; EVALUE=1e-38 ;
Q/S_length_ratio=0.983"
/note="Pfam_scan:hit_1 (8..171);
Pfam:PF13177.1:DNA_pol3_delta2;
Pfam_type:Domain;HMM_aln_Length:159; HMM_Length:162;
EVALUE:2.8e-43; BITSCORE: 147.3"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0005622"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:2.7.7.7"
BEGIN
1 MSWDRIRGQD GPRNTFFTAH EIGRLAHSYL LVGPEGIGKR LFARELAKAF LCERPPAKLT
61 ACDRCPACAQ VEASTHPDLL FLRTPADKHE LPVEDMREFC SQVALKPTRG ARKIGIIEDA
121 DDFNTSSANS FLKTLEEPPP GALLLLIATT TDRQLATILS RCQVVRFAPL TPPDLKAILE
181 AQGIEDAQKR DRLARLGNGS VSRALALDDD SIWQVRQKLI DGLTSPRPQF QPLAETWSKF
241 NEDAGKETAA QRMRASLVLQ FLIEAVQHAL KLSLGATVPE IDATEVDRLK AFADRVGTDT
301 LMELLDKFVE ADFYVERRVQ LILVVESVLA KFPREKG
//