LOCUS VTR95934.1 358 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana peptide chain release factor 1 : Peptide
chain release factor 1 OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=prfA PE=3
SV=1: PCRF: RF-1 protein.
ACCESSION LR593886-5235
PROTEIN_ID VTR95934.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_17800"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SSL8|D5SSL8_PLAL2 ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Peptide chain
release factor 1 OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=prfA PE=3 SV=1 ;
EVALUE=1e-115 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R053|E8R053_ISOPI ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Peptide chain
release factor 1 OS=Isosphaera pallida (strain ATCC 43644
/ DSM 9630 / IS1B) GN=prfA PE=3 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SSY4|F0SSY4_PLABD ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=Peptide chain
release factor 1 OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=prfA PE=3 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DFK6|L0DFK6_SINAD ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Peptide chain
release factor 1 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=prfA PE=3
SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H5SC11|H5SC11_9BACT ;
ALN/Q_length_ratio=1.017 ; DESCRIPTION=Peptide chain
release factor 1 OS=uncultured planctomycete GN=prfA PE=3
SV=1 ; EVALUE=1e-111 ; Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A098R377|A0A098R377_9SPIO ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Peptide chain
release factor 1 OS=Spirochaeta sp. JC230 GN=prfA PE=3
SV=1 ; EVALUE=1e-110 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B9Y5D5|B9Y5D5_9FIRM ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Peptide chain
release factor 1 OS=Holdemania filiformis DSM 12042
GN=prfA PE=3 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F3ZT11|F3ZT11_9BACE ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Peptide chain
release factor 1 OS=Bacteroides coprosuis DSM 18011
GN=prfA PE=3 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5U3P8|M5U3P8_9PLAN ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Peptide chain
release factor 1 OS=Rhodopirellula sallentina SM41 GN=prfA
PE=3 SV=1 ; EVALUE=1e-108 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|H8MQW9|H8MQW9_CORCM ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Peptide chain
release factor 1 OS=Corallococcus coralloides (strain ATCC
25202 / DSM 2259 / NBRC 100086 / M2) GN=prfA PE=3 SV=1 ;
EVALUE=1e-108 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I3D6V6|I3D6V6_9PAST ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Peptide chain
release factor 1 OS=Pasteurella bettyae CCUG 2042 GN=prfA
PE=3 SV=1 ; EVALUE=1e-107 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A078KM88|A0A078KM88_9FIRM ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Peptide chain
release factor 1 OS=[Clostridium] cellulosi GN=prfA PE=3
SV=1 ; EVALUE=1e-106 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C7R9G0|C7R9G0_KANKD ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Peptide chain
release factor 1 OS=Kangiella koreensis (strain DSM 16069
/ KCTC 12182 / SW-125) GN=prfA PE=3 SV=1 ; EVALUE=1e-106 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F9Q942|F9Q942_9PAST ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Peptide chain
release factor 1 OS=Haemophilus pittmaniae HK 85 GN=prfA
PE=3 SV=1 ; EVALUE=1e-106 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_13 ; ACCESSION=Q3A129 ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Peptide chain
release factor 1 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=prfA PE=3 SV=1 ; EVALUE=1e-106 ;
Q/S_length_ratio=1.006"
/note="Pfam_scan:hit_1 (59..174); Pfam:PF03462.13:PCRF;
Pfam_type:Domain;HMM_aln_Length:112; HMM_Length:116;
EVALUE:2.4e-33; BITSCORE: 114.3"
/note="Pfam_scan:hit_2 (203..320); Pfam:PF00472.15:RF-1;
Pfam_type:Family;HMM_aln_Length:109; HMM_Length:114;
EVALUE:4.6e-34; BITSCORE: 116.6"
/note="GO_domain:GO:0008135"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0006457"
BEGIN
1 MFPVLETQLT RYRDLEQQLY DPVIASDPAK AGAISKERGA LAKIVEPYIE YKNLCTAIAD
61 AEAMAADPDL KAMADEELAD LRPKRDALHA KIEDQLLIDP SEDFSNLIVE IRAGTGGDEA
121 ALFAGNLYEM YTRYVREKGW KLEELAFSPG EAGGFKEITF SVSGDDVYQF LRYESGGHRV
181 QRVPATETQG RIHTSAATVA VMPEPEEAQV VINEAADIEW ERMRAGGAGG QHVNKTESAV
241 RIWYKKGTPD EMEVKCQDGR SQGKNYEQAM RILRSRLFER QQEKLHRERS DMRKSLIGTG
301 DRNARIRTYN YPQNRCTDHR IEFTAYRLDS IMAGDLEQMV QPMRDHVRKE KLAANSAK
//