LOCUS VTR95889.1 308 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Xylose isomerase domain protein TIM
barrel OS=Solibacter usitatus (strain Ellin6076) GN=Acid_7683
PE=4 SV=1: AP_endonuc_2 protein.
ACCESSION LR593886-5190
PROTEIN_ID VTR95889.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_18250"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q01P38|Q01P38_SOLUE ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Solibacter usitatus (strain
Ellin6076) GN=Acid_7683 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.116"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DG32|L0DG32_SINAD ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Hydroxypyruvate
isomerase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3517
PE=4 SV=1 ; EVALUE=1e-101 ; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6BZF0|A6BZF0_9PLAN ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_28994
PE=4 SV=1 ; EVALUE=2e-95 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5SWX4|D5SWX4_PLAL2 ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_1642 PE=4 SV=1 ; EVALUE=9e-93 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F0SN83|F0SN83_PLABD ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=Plabr_3515 PE=4 SV=1 ;
EVALUE=6e-88 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZZZ0|A3ZZZ0_9PLAN ;
ALN/Q_length_ratio=0.867 ; DESCRIPTION=Hydroxypyruvate
isomerase OS=Blastopirellula marina DSM 3645
GN=DSM3645_27186 PE=3 SV=1 ; EVALUE=7e-76 ;
Q/S_length_ratio=1.077"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6DKS6|A6DKS6_9BACT ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Uncharacterized
protein OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_01195
PE=4 SV=1 ; EVALUE=2e-75 ; Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2QYM9|D2QYM9_PIRSD ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=Hydroxypyruvate
isomerase OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_3527 PE=3 SV=1 ; EVALUE=1e-72 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I2EQ93|I2EQ93_EMTOG ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Emticicia
oligotrophica (strain DSM 17448 / GPTSA100-15)
GN=Emtol_0693 PE=4 SV=1 ; EVALUE=1e-69 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D2QPG1|D2QPG1_SPILD ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Spirosoma linguale (strain
ATCC 33905 / DSM 74 / LMG 10896) GN=Slin_3461 PE=4 SV=1 ;
EVALUE=2e-69 ; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D0MEA3|D0MEA3_RHOM4 ;
ALN/Q_length_ratio=0.922 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodothermus marinus (strain
ATCC 43812 / DSM 4252 / R-10) GN=Rmar_0423 PE=4 SV=1 ;
EVALUE=3e-68 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|G2SIN2|G2SIN2_RHOMR ;
ALN/Q_length_ratio=0.922 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Rhodothermus
marinus SG0.5JP17-172 GN=Rhom172_0421 PE=4 SV=1 ;
EVALUE=7e-68 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S7VBV5|S7VBV5_9BACT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Hydroxypyruvate
isomerase OS=Cyclobacterium qasimii M12-11B GN=ADICYQ_3485
PE=4 SV=1 ; EVALUE=1e-67 ; Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R7ZL51|R7ZL51_9BACT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Hydroxypyruvate
isomerase OS=Cyclobacteriaceae bacterium AK24 GN=ADIS_4732
PE=4 SV=1 ; EVALUE=1e-67 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C7PIK7|C7PIK7_CHIPD ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Chitinophaga pinensis (strain
ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)
GN=Cpin_0698 PE=4 SV=1 ; EVALUE=2e-67 ;
Q/S_length_ratio=1.037"
/note="Pfam_scan:hit_1 (53..269);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:163; HMM_Length:213;
EVALUE:1.1e-22; BITSCORE: 80.3"
BEGIN
1 MHSRRQILKG AVAASALTAS TVHTMTHAEE SKTKLKGRTN QSVAFWCFNA RGEKWNTEKV
61 CAVTKDLGCK SVELIAPEDW GALKKHDLVC AIAPNGMPGA PFMRGFNNEK FHDEIIERTG
121 KTIDACADAK YPNVIAFVGY KWTNPDDPKS AVISTDDALA NCVKGLKKLA LHAEKKGVTV
181 CLEHLNTRDD SDPMKGHPGY QGDDLDFVAT VLKKVGSPRI KLLFDIYHVQ VMHGDLLRRI
241 DQTKELIGHV HTAGVPGRGE LDDLQEVNFP AVVKKLVDVG YTGYIGHEFI PTRDPLAGLK
301 QAVTLCDV
//