LOCUS VTR95829.1 322 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana family transcriptional regulator :
Transcriptional regulator, AraC family OS=Variovorax paradoxus
(strain EPS) GN=Varpa_5754 PE=4 SV=1: DUF4066: HTH_18
protein.
ACCESSION LR593886-5130
PROTEIN_ID VTR95829.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_18850"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E6UWH6|E6UWH6_VARPE ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Variovorax paradoxus (strain
EPS) GN=Varpa_5754 PE=4 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q1MDC3|Q1MDC3_RHIL3 ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Putative AraC
family transcriptional regulator OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=RL3566 PE=4 SV=1
; EVALUE=1e-141 ; Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|C6ATP3|C6ATP3_RHILS ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Rhizobium leguminosarum bv.
trifolii (strain WSM1325) GN=Rleg_3129 PE=4 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A069P5E2|A0A069P5E2_9BURK ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=AraC family
transcriptional regulator OS=Burkholderia grimmiae
GN=BG57_27780 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|J3CCT0|J3CCT0_9RHIZ ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Transcriptional
regulator containing an amidase domain and an AraC-type
DNA-binding HTH domain OS=Phyllobacterium sp. YR531
GN=PMI41_02610 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A023XSI7|A0A023XSI7_BRAJP ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=AraC family
transcriptional regulator OS=Bradyrhizobium japonicum
SEMIA 5079 GN=BJS_04664 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A0A3XVR0|A0A0A3XVR0_BRAJP ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=AraC family
transcriptional regulator OS=Bradyrhizobium japonicum
GN=MA20_21920 PE=4 SV=1 ; EVALUE=1e-137 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A023NRN6|A0A023NRN6_9GAMM ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=AraC family
transcriptional regulator OS=Dyella jiangningensis
GN=CH75_09285 PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A095F7Y2|A0A095F7Y2_BURML ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=Helix-turn-helix
domain protein OS=Burkholderia mallei GN=DM48_3179 PE=4
SV=1 ; EVALUE=1e-135 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A095Y9Z9|A0A095Y9Z9_BURGA ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=AraC family
transcriptional regulator OS=Burkholderia gladioli
GN=LA03_18200 PE=4 SV=1 ; EVALUE=1e-135 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2LJX7|F2LJX7_BURGS ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Burkholderia gladioli (strain
BSR3) GN=bgla_2g09660 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W1K096|W1K096_9BRAD ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=AraC family
transcriptional regulator OS=Bradyrhizobium sp. CCGE-LA001
GN=BCCGELA001_06538 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A085V0F4|A0A085V0F4_PSESX ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas syringae
GN=IV02_19905 PE=4 SV=1 ; EVALUE=1e-131 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A024HF07|A0A024HF07_PSESB ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas knackmussii B13
GN=PKB_2263 PE=4 SV=1 ; EVALUE=1e-131 ;
Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|G8MLR9|G8MLR9_9BURK ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Burkholderia sp. YI23 GN=araC
PE=4 SV=1 ; EVALUE=1e-131 ; Q/S_length_ratio=0.982"
/note="Pfam_scan:hit_1 (10..177); Pfam:PF13278.1:DUF4066;
Pfam_type:Domain;HMM_aln_Length:162; HMM_Length:166;
EVALUE:1.7e-34; BITSCORE: 118.4"
/note="Pfam_scan:hit_2 (239..317); Pfam:PF12833.2:HTH_18;
Pfam_type:Domain;HMM_aln_Length:80; HMM_Length:81;
EVALUE:1.7e-20; BITSCORE: 72.8"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MPAPKTITIV APGGVQLTDV SGPLDVFAEA NSQLQRAVYR LEVVATALGP LRSSSGVRLV
61 PDRVIGEPGT ERTHTLLVAG APGAPNQNPP VALLNWLRTE TKRVRRYGSV CSGAFYLAAA
121 GVLDGRRVTT HWAAADQLAR TFLALRVEPD ALYVRDGPVR TAAGVTAGMD LALALVEEDV
181 GRDVALKVAA QLVMFFKRPG GQLQFSRNGA AVPVGRSTLQ ELQRWVVAHP GEDHSVTQLA
241 ARVGLSPRHF ARLFRSETGT TPAAWVEAAR VEAARGLLES ASAPKQVATL CGFTDVNVLR
301 RAFQRCLGVT PAEYRKRFRR DE
//